Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 RBM17P1-201ENST00000453646 1190 ntBASIC18.61■□□□□ 0.57
CASC4Q6P4E1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 MIR4785-201ENST00000585005 73 ntBASIC18.61■□□□□ 0.57
CASC4Q6P4E1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 SLC25A1P2-201ENST00000430693 912 ntBASIC18.6■□□□□ 0.57
CASC4Q6P4E1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 AP003041.3-201ENST00000527151 707 ntBASIC18.6■□□□□ 0.57
CASC4Q6P4E1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASC4Q6P4E1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 AL096828.2-201ENST00000567259 1965 ntBASIC18.59■□□□□ 0.57
CASC4Q6P4E1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 KRT18P23-201ENST00000435622 1283 ntBASIC18.59■□□□□ 0.57
CASC4Q6P4E1 TSPY17P-201ENST00000450329 467 ntBASIC18.59■□□□□ 0.57
CASC4Q6P4E1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 AP000525.1-201ENST00000608286 694 ntBASIC18.59■□□□□ 0.57
CASC4Q6P4E1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASC4Q6P4E1 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.59■□□□□ 0.57
CASC4Q6P4E1 AL163051.1-201ENST00000569214 1512 ntBASIC18.59■□□□□ 0.57
CASC4Q6P4E1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CASC4Q6P4E1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.58■□□□□ 0.57
CASC4Q6P4E1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.58■□□□□ 0.57
CASC4Q6P4E1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.58■□□□□ 0.57
CASC4Q6P4E1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.58■□□□□ 0.57
CASC4Q6P4E1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CASC4Q6P4E1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CASC4Q6P4E1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CASC4Q6P4E1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CASC4Q6P4E1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CASC4Q6P4E1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CASC4Q6P4E1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CASC4Q6P4E1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 AL390955.1-201ENST00000428694 934 ntBASIC18.58■□□□□ 0.56
CASC4Q6P4E1 CCR12P-201ENST00000446203 998 ntBASIC18.58■□□□□ 0.56
CASC4Q6P4E1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms