Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 PHGDH-209ENST00000641074 1780 ntBASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4R3AQ6IN85 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 KRT18P48-201ENST00000434763 852 ntBASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3AQ6IN85 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP4R3AQ6IN85 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 AC005332.1-201ENST00000577698 1310 ntBASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 AL645929.1-201ENST00000420084 975 ntBASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms