Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 AP003041.3-201ENST00000527151 707 ntBASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 AC008622.2-201ENST00000617006 1229 ntBASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPRIN2Q6IMN6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 SLC25A3P1-201ENST00000443844 931 ntBASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 AC005363.2-201ENST00000618631 242 ntBASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPRIN2Q6IMN6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 HMGA1P5-201ENST00000412453 271 ntBASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 AL590326.2-201ENST00000625139 305 ntBASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CAPRIN2Q6IMN6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.46■□□□□ 0.54
CAPRIN2Q6IMN6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CAPRIN2Q6IMN6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPRIN2Q6IMN6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CAPRIN2Q6IMN6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.45■□□□□ 0.54
CAPRIN2Q6IMN6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.45■□□□□ 0.54
CAPRIN2Q6IMN6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CAPRIN2Q6IMN6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CAPRIN2Q6IMN6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPRIN2Q6IMN6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CAPRIN2Q6IMN6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPRIN2Q6IMN6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.45■□□□□ 0.54
CAPRIN2Q6IMN6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.45■□□□□ 0.54
CAPRIN2Q6IMN6 AC113347.1-201ENST00000413321 391 ntBASIC18.45■□□□□ 0.54
CAPRIN2Q6IMN6 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms