Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 AL627223.1-201ENST00000416693 442 ntBASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 AC010336.2-201ENST00000564226 506 ntBASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 TUBB3P1-201ENST00000405796 1332 ntBASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF38BQ5VTL8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRPF38BQ5VTL8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRPF38BQ5VTL8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
PRPF38BQ5VTL8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
PRPF38BQ5VTL8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 HCG4-201ENST00000418983 998 ntBASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 AC107890.1-201ENST00000422478 521 ntBASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 AL512638.1-201ENST00000457493 794 ntBASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 AC113404.2-201ENST00000507884 177 ntBASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 LINC01126-201ENST00000623515 1646 ntBASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF38BQ5VTL8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 IGHV3-65-201ENST00000523210 341 ntBASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 FAM8A2P-201ENST00000528813 1142 ntBASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 AL390754.1-201ENST00000619088 582 ntBASIC19.63■□□□□ 0.73
PRPF38BQ5VTL8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 HAUS4P1-201ENST00000406739 1145 ntBASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 MIR1909-201ENST00000411312 80 ntBASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF38BQ5VTL8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms