Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.6■□□□□ 0.41
RIF1Q5UIP0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RIF1Q5UIP0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RIF1Q5UIP0 MTCL1P1-201ENST00000446207 792 ntBASIC17.6■□□□□ 0.41
RIF1Q5UIP0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RIF1Q5UIP0 AC004877.2-201ENST00000623941 599 ntBASIC17.6■□□□□ 0.41
RIF1Q5UIP0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RIF1Q5UIP0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RIF1Q5UIP0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RIF1Q5UIP0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RIF1Q5UIP0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.6■□□□□ 0.41
RIF1Q5UIP0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 Z82202.1-201ENST00000623446 1880 ntBASIC17.59■□□□□ 0.41
RIF1Q5UIP0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIF1Q5UIP0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RIF1Q5UIP0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RIF1Q5UIP0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RIF1Q5UIP0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.58■□□□□ 0.41
RIF1Q5UIP0 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.58■□□□□ 0.41
RIF1Q5UIP0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.58■□□□□ 0.41
RIF1Q5UIP0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.58■□□□□ 0.41
RIF1Q5UIP0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.58■□□□□ 0.41
RIF1Q5UIP0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RIF1Q5UIP0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.58■□□□□ 0.41
RIF1Q5UIP0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.58■□□□□ 0.4
RIF1Q5UIP0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 AL121761.2-201ENST00000598007 1648 ntBASIC17.57■□□□□ 0.4
RIF1Q5UIP0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 AL627223.1-201ENST00000416693 442 ntBASIC17.57■□□□□ 0.4
RIF1Q5UIP0 UGT1A2P-201ENST00000454886 866 ntBASIC17.57■□□□□ 0.4
RIF1Q5UIP0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 AL596325.1-201ENST00000563991 1082 ntBASIC17.57■□□□□ 0.4
RIF1Q5UIP0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.57■□□□□ 0.4
RIF1Q5UIP0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms