Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDH1Q08174 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.58■□□□□ 0.41
PCDH1Q08174 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH1Q08174 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PCDH1Q08174 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDH1Q08174 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH1Q08174 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH1Q08174 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH1Q08174 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PCDH1Q08174 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH1Q08174 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
PCDH1Q08174 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH1Q08174 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH1Q08174 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH1Q08174 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH1Q08174 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH1Q08174 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH1Q08174 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH1Q08174 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH1Q08174 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH1Q08174 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PCDH1Q08174 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH1Q08174 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PCDH1Q08174 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
PCDH1Q08174 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDH1Q08174 REXO1L9P-201ENST00000604264 2108 ntBASIC17.57■□□□□ 0.4
PCDH1Q08174 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.57■□□□□ 0.4
PCDH1Q08174 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
PCDH1Q08174 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDH1Q08174 AC010203.1-204ENST00000548782 407 ntBASIC17.57■□□□□ 0.4
PCDH1Q08174 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH1Q08174 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH1Q08174 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PCDH1Q08174 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH1Q08174 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 KRT89P-201ENST00000620027 1478 ntBASIC17.56■□□□□ 0.4
PCDH1Q08174 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDH1Q08174 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDH1Q08174 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH1Q08174 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH1Q08174 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH1Q08174 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH1Q08174 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 AC113347.1-201ENST00000413321 391 ntBASIC17.56■□□□□ 0.4
PCDH1Q08174 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDH1Q08174 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH1Q08174 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH1Q08174 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH1Q08174 GCSHP2-201ENST00000560971 527 ntBASIC17.56■□□□□ 0.4
PCDH1Q08174 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.56■□□□□ 0.4
PCDH1Q08174 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDH1Q08174 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH1Q08174 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PCDH1Q08174 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
PCDH1Q08174 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH1Q08174 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH1Q08174 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PCDH1Q08174 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH1Q08174 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDH1Q08174 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH1Q08174 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH1Q08174 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH1Q08174 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH1Q08174 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH1Q08174 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH1Q08174 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH1Q08174 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH1Q08174 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH1Q08174 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH1Q08174 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms