Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SOX4Q06945 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX4Q06945 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.41■□□□□ 0.7
SOX4Q06945 AC079781.3-201ENST00000449110 356 ntBASIC19.41■□□□□ 0.7
SOX4Q06945 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SOX4Q06945 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX4Q06945 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SOX4Q06945 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.41■□□□□ 0.7
SOX4Q06945 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.41■□□□□ 0.7
SOX4Q06945 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.41■□□□□ 0.7
SOX4Q06945 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.41■□□□□ 0.7
SOX4Q06945 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SOX4Q06945 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX4Q06945 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SOX4Q06945 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SOX4Q06945 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX4Q06945 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SOX4Q06945 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX4Q06945 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX4Q06945 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SOX4Q06945 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SOX4Q06945 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX4Q06945 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX4Q06945 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SOX4Q06945 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX4Q06945 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.4■□□□□ 0.7
SOX4Q06945 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SOX4Q06945 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX4Q06945 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX4Q06945 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX4Q06945 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.4■□□□□ 0.7
SOX4Q06945 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SOX4Q06945 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.4■□□□□ 0.7
SOX4Q06945 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SOX4Q06945 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SOX4Q06945 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.4■□□□□ 0.7
SOX4Q06945 KRT16P4-201ENST00000453883 522 ntBASIC19.4■□□□□ 0.7
SOX4Q06945 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.4■□□□□ 0.7
SOX4Q06945 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.4■□□□□ 0.7
SOX4Q06945 AL031008.1-201ENST00000619963 541 ntBASIC19.4■□□□□ 0.7
SOX4Q06945 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.4■□□□□ 0.7
SOX4Q06945 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SOX4Q06945 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SOX4Q06945 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SOX4Q06945 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX4Q06945 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX4Q06945 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX4Q06945 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SOX4Q06945 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.39■□□□□ 0.7
SOX4Q06945 AL138781.2-201ENST00000617896 1843 ntBASIC19.39■□□□□ 0.7
SOX4Q06945 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.39■□□□□ 0.7
SOX4Q06945 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SOX4Q06945 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SOX4Q06945 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SOX4Q06945 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX4Q06945 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX4Q06945 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX4Q06945 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX4Q06945 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SOX4Q06945 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.39■□□□□ 0.69
SOX4Q06945 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.39■□□□□ 0.69
SOX4Q06945 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.39■□□□□ 0.69
SOX4Q06945 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.39■□□□□ 0.69
SOX4Q06945 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.39■□□□□ 0.69
SOX4Q06945 AC096582.2-201ENST00000510860 516 ntBASIC19.39■□□□□ 0.69
SOX4Q06945 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.39■□□□□ 0.69
SOX4Q06945 AC104692.2-201ENST00000603054 253 ntBASIC19.39■□□□□ 0.69
SOX4Q06945 AL138831.2-201ENST00000606564 490 ntBASIC19.39■□□□□ 0.69
SOX4Q06945 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SOX4Q06945 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX4Q06945 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX4Q06945 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SOX4Q06945 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SOX4Q06945 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX4Q06945 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX4Q06945 AC093010.1-201ENST00000473625 1624 ntBASIC19.39■□□□□ 0.69
SOX4Q06945 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SOX4Q06945 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX4Q06945 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SOX4Q06945 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
SOX4Q06945 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SOX4Q06945 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.39■□□□□ 0.69
SOX4Q06945 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.39■□□□□ 0.69
SOX4Q06945 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.39■□□□□ 0.69
SOX4Q06945 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.39■□□□□ 0.69
SOX4Q06945 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SOX4Q06945 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.39■□□□□ 0.69
SOX4Q06945 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.39■□□□□ 0.69
SOX4Q06945 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX4Q06945 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX4Q06945 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX4Q06945 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SOX4Q06945 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX4Q06945 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SOX4Q06945 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX4Q06945 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SOX4Q06945 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX4Q06945 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SOX4Q06945 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX4Q06945 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms