Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4XP62701 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4XP62701 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4XP62701 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RPS4XP62701 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4XP62701 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4XP62701 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4XP62701 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4XP62701 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.46■□□□□ 0.23
RPS4XP62701 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.46■□□□□ 0.23
RPS4XP62701 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4XP62701 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4XP62701 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4XP62701 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
RPS4XP62701 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4XP62701 AC139887.4-201ENST00000607877 719 ntBASIC16.46■□□□□ 0.23
RPS4XP62701 AL138966.2-201ENST00000621997 464 ntBASIC16.46■□□□□ 0.23
RPS4XP62701 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4XP62701 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.46■□□□□ 0.23
RPS4XP62701 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.46■□□□□ 0.23
RPS4XP62701 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RPS4XP62701 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4XP62701 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4XP62701 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.46■□□□□ 0.23
RPS4XP62701 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.46■□□□□ 0.22
RPS4XP62701 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
RPS4XP62701 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.46■□□□□ 0.22
RPS4XP62701 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.45■□□□□ 0.22
RPS4XP62701 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.45■□□□□ 0.22
RPS4XP62701 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
RPS4XP62701 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.45■□□□□ 0.22
RPS4XP62701 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
RPS4XP62701 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RPS4XP62701 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
RPS4XP62701 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.45■□□□□ 0.22
RPS4XP62701 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RPS4XP62701 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 COX11P1-201ENST00000489116 835 ntBASIC16.45■□□□□ 0.22
RPS4XP62701 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RPS4XP62701 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.45■□□□□ 0.22
RPS4XP62701 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.45■□□□□ 0.22
RPS4XP62701 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.45■□□□□ 0.22
RPS4XP62701 AC091076.1-201ENST00000610741 619 ntBASIC16.45■□□□□ 0.22
RPS4XP62701 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RPS4XP62701 AL024508.2-201ENST00000607749 1894 ntBASIC16.45■□□□□ 0.22
RPS4XP62701 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RPS4XP62701 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
RPS4XP62701 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.45■□□□□ 0.22
RPS4XP62701 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.45■□□□□ 0.22
RPS4XP62701 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.45■□□□□ 0.22
RPS4XP62701 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 LINC01126-201ENST00000623515 1646 ntBASIC16.45■□□□□ 0.22
RPS4XP62701 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.45■□□□□ 0.22
RPS4XP62701 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.45■□□□□ 0.22
RPS4XP62701 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4XP62701 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
RPS4XP62701 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4XP62701 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.44■□□□□ 0.22
RPS4XP62701 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.44■□□□□ 0.22
RPS4XP62701 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4XP62701 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.44■□□□□ 0.22
RPS4XP62701 AC134043.2-201ENST00000624206 2238 ntBASIC16.44■□□□□ 0.22
RPS4XP62701 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.44■□□□□ 0.22
RPS4XP62701 FAM8A6P-201ENST00000407496 1135 ntBASIC16.44■□□□□ 0.22
RPS4XP62701 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.44■□□□□ 0.22
RPS4XP62701 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.44■□□□□ 0.22
RPS4XP62701 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.44■□□□□ 0.22
RPS4XP62701 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4XP62701 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.44■□□□□ 0.22
RPS4XP62701 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4XP62701 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.44■□□□□ 0.22
RPS4XP62701 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RPS4XP62701 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4XP62701 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.44■□□□□ 0.22
RPS4XP62701 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.44■□□□□ 0.22
RPS4XP62701 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4XP62701 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.44■□□□□ 0.22
RPS4XP62701 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RPS4XP62701 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RPS4XP62701 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4XP62701 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.44■□□□□ 0.22
RPS4XP62701 AP000997.3-201ENST00000623333 2250 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms