Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
WNT3AP56704 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
WNT3AP56704 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
WNT3AP56704 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
WNT3AP56704 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
WNT3AP56704 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.41■□□□□ 0.54
WNT3AP56704 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
WNT3AP56704 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.41■□□□□ 0.54
WNT3AP56704 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
WNT3AP56704 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
WNT3AP56704 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
WNT3AP56704 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
WNT3AP56704 HCG11-201ENST00000411553 5696 ntBASIC18.41■□□□□ 0.54
WNT3AP56704 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
WNT3AP56704 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
WNT3AP56704 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
WNT3AP56704 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
WNT3AP56704 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
WNT3AP56704 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
WNT3AP56704 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.41■□□□□ 0.54
WNT3AP56704 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.41■□□□□ 0.54
WNT3AP56704 AL136038.4-201ENST00000603606 1261 ntBASIC18.41■□□□□ 0.54
WNT3AP56704 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
WNT3AP56704 AC138028.4-201ENST00000564984 1845 ntBASIC18.41■□□□□ 0.54
WNT3AP56704 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
WNT3AP56704 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
WNT3AP56704 AL391807.1-203ENST00000604392 2365 ntBASIC18.41■□□□□ 0.54
WNT3AP56704 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.41■□□□□ 0.54
WNT3AP56704 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.41■□□□□ 0.54
WNT3AP56704 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
WNT3AP56704 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
WNT3AP56704 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.41■□□□□ 0.54
WNT3AP56704 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
WNT3AP56704 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.4■□□□□ 0.54
WNT3AP56704 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.4■□□□□ 0.54
WNT3AP56704 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.4■□□□□ 0.54
WNT3AP56704 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
WNT3AP56704 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.4■□□□□ 0.54
WNT3AP56704 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.4■□□□□ 0.54
WNT3AP56704 KRT18P38-201ENST00000449496 1282 ntBASIC18.4■□□□□ 0.54
WNT3AP56704 HOMER2P1-201ENST00000455653 964 ntBASIC18.4■□□□□ 0.54
WNT3AP56704 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.4■□□□□ 0.54
WNT3AP56704 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.4■□□□□ 0.54
WNT3AP56704 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.4■□□□□ 0.54
WNT3AP56704 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.4■□□□□ 0.54
WNT3AP56704 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.4■□□□□ 0.54
WNT3AP56704 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.4■□□□□ 0.54
WNT3AP56704 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.4■□□□□ 0.54
WNT3AP56704 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WNT3AP56704 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
WNT3AP56704 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
WNT3AP56704 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.54
WNT3AP56704 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
WNT3AP56704 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
WNT3AP56704 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
WNT3AP56704 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.39■□□□□ 0.53
WNT3AP56704 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.39■□□□□ 0.53
WNT3AP56704 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
WNT3AP56704 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
WNT3AP56704 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.39■□□□□ 0.53
WNT3AP56704 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
WNT3AP56704 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 TMPOP1-202ENST00000424642 1267 ntBASIC18.39■□□□□ 0.53
WNT3AP56704 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
WNT3AP56704 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.39■□□□□ 0.53
WNT3AP56704 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.39■□□□□ 0.53
WNT3AP56704 AC092597.1-201ENST00000487352 616 ntBASIC18.39■□□□□ 0.53
WNT3AP56704 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.39■□□□□ 0.53
WNT3AP56704 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 AC138932.1-201ENST00000534164 6830 ntBASIC18.39■□□□□ 0.53
WNT3AP56704 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms