Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.06■□□□□ 0.8
PEX3P56589 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEX3P56589 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PEX3P56589 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.05■□□□□ 0.8
PEX3P56589 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PEX3P56589 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.05■□□□□ 0.8
PEX3P56589 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.05■□□□□ 0.8
PEX3P56589 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.05■□□□□ 0.8
PEX3P56589 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 UPK3BP1-201ENST00000428678 509 ntBASIC20.05■□□□□ 0.8
PEX3P56589 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.05■□□□□ 0.8
PEX3P56589 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.05■□□□□ 0.8
PEX3P56589 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.05■□□□□ 0.8
PEX3P56589 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
PEX3P56589 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PEX3P56589 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PEX3P56589 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.05■□□□□ 0.8
PEX3P56589 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
PEX3P56589 AL353692.3-201ENST00000407031 1396 ntBASIC20.05■□□□□ 0.8
PEX3P56589 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX3P56589 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX3P56589 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX3P56589 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX3P56589 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.04■□□□□ 0.8
PEX3P56589 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PEX3P56589 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
PEX3P56589 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PEX3P56589 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.04■□□□□ 0.8
PEX3P56589 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.04■□□□□ 0.8
PEX3P56589 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.04■□□□□ 0.8
PEX3P56589 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX3P56589 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX3P56589 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.04■□□□□ 0.8
PEX3P56589 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.04■□□□□ 0.8
PEX3P56589 BX276092.5-203ENST00000456199 560 ntBASIC20.04■□□□□ 0.8
PEX3P56589 KRT8P26-201ENST00000534154 1276 ntBASIC20.04■□□□□ 0.8
PEX3P56589 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PEX3P56589 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX3P56589 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PEX3P56589 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX3P56589 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX3P56589 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX3P56589 LINC00602-201ENST00000629776 2065 ntBASIC20.04■□□□□ 0.8
PEX3P56589 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PEX3P56589 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.04■□□□□ 0.8
PEX3P56589 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PEX3P56589 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PEX3P56589 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PEX3P56589 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PEX3P56589 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PEX3P56589 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PEX3P56589 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PEX3P56589 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PEX3P56589 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PEX3P56589 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PEX3P56589 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.03■□□□□ 0.8
PEX3P56589 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.03■□□□□ 0.8
PEX3P56589 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.03■□□□□ 0.8
PEX3P56589 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.03■□□□□ 0.8
PEX3P56589 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PEX3P56589 AL121672.3-201ENST00000608644 468 ntBASIC20.03■□□□□ 0.8
PEX3P56589 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
PEX3P56589 AC016734.2-201ENST00000624325 1377 ntBASIC20.03■□□□□ 0.8
PEX3P56589 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PEX3P56589 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.03■□□□□ 0.8
PEX3P56589 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PEX3P56589 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.03■□□□□ 0.8
PEX3P56589 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PEX3P56589 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PEX3P56589 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PEX3P56589 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PEX3P56589 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX3P56589 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
PEX3P56589 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.02■□□□□ 0.8
PEX3P56589 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.02■□□□□ 0.8
PEX3P56589 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.02■□□□□ 0.8
PEX3P56589 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX3P56589 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX3P56589 AC069148.1-201ENST00000608741 768 ntBASIC20.02■□□□□ 0.8
PEX3P56589 AC093458.2-201ENST00000623150 629 ntBASIC20.02■□□□□ 0.8
PEX3P56589 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PEX3P56589 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms