Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PMS1P54277 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS1P54277 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PMS1P54277 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PMS1P54277 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PMS1P54277 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.05■□□□□ 0.8
PMS1P54277 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.05■□□□□ 0.8
PMS1P54277 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PMS1P54277 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.05■□□□□ 0.8
PMS1P54277 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS1P54277 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.05■□□□□ 0.8
PMS1P54277 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PMS1P54277 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.05■□□□□ 0.8
PMS1P54277 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PMS1P54277 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PMS1P54277 FZD10-202ENST00000539839 3282 ntBASIC20.05■□□□□ 0.8
PMS1P54277 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PMS1P54277 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.05■□□□□ 0.8
PMS1P54277 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS1P54277 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS1P54277 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS1P54277 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS1P54277 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PMS1P54277 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PMS1P54277 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.05■□□□□ 0.8
PMS1P54277 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PMS1P54277 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PMS1P54277 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PMS1P54277 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PMS1P54277 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS1P54277 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS1P54277 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS1P54277 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PMS1P54277 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PMS1P54277 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS1P54277 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PMS1P54277 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.04■□□□□ 0.8
PMS1P54277 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PMS1P54277 AC087499.1-201ENST00000418141 1075 ntBASIC20.04■□□□□ 0.8
PMS1P54277 ECEL1P3-201ENST00000427961 737 ntBASIC20.04■□□□□ 0.8
PMS1P54277 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PMS1P54277 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.04■□□□□ 0.8
PMS1P54277 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.04■□□□□ 0.8
PMS1P54277 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.04■□□□□ 0.8
PMS1P54277 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.04■□□□□ 0.8
PMS1P54277 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.04■□□□□ 0.8
PMS1P54277 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.04■□□□□ 0.8
PMS1P54277 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.04■□□□□ 0.8
PMS1P54277 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PMS1P54277 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.04■□□□□ 0.8
PMS1P54277 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PMS1P54277 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS1P54277 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.04■□□□□ 0.8
PMS1P54277 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PMS1P54277 AC006116.8-202ENST00000587620 1550 ntBASIC20.04■□□□□ 0.8
PMS1P54277 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS1P54277 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PMS1P54277 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PMS1P54277 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS1P54277 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.03■□□□□ 0.8
PMS1P54277 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS1P54277 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS1P54277 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS1P54277 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS1P54277 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS1P54277 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS1P54277 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.03■□□□□ 0.8
PMS1P54277 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.03■□□□□ 0.8
PMS1P54277 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.03■□□□□ 0.8
PMS1P54277 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.03■□□□□ 0.8
PMS1P54277 MIR3917-201ENST00000580971 93 ntBASIC20.03■□□□□ 0.8
PMS1P54277 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.03■□□□□ 0.8
PMS1P54277 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PMS1P54277 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS1P54277 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS1P54277 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS1P54277 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PMS1P54277 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.03■□□□□ 0.8
PMS1P54277 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS1P54277 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PMS1P54277 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PMS1P54277 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PMS1P54277 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
PMS1P54277 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PMS1P54277 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.02■□□□□ 0.8
PMS1P54277 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PMS1P54277 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PMS1P54277 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.02■□□□□ 0.8
PMS1P54277 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PMS1P54277 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PMS1P54277 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PMS1P54277 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
PMS1P54277 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PMS1P54277 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.02■□□□□ 0.8
PMS1P54277 NEK4P2-201ENST00000580004 1012 ntBASIC20.02■□□□□ 0.8
PMS1P54277 AL138966.2-201ENST00000621997 464 ntBASIC20.02■□□□□ 0.8
PMS1P54277 AL157888.1-201ENST00000631930 593 ntBASIC20.02■□□□□ 0.8
PMS1P54277 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.02■□□□□ 0.8
PMS1P54277 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PMS1P54277 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms