Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCR9P51686 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.06■□□□□ 0.16
CCR9P51686 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.06■□□□□ 0.16
CCR9P51686 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.06■□□□□ 0.16
CCR9P51686 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.06■□□□□ 0.16
CCR9P51686 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.06■□□□□ 0.16
CCR9P51686 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCR9P51686 AC128676.1-201ENST00000454392 318 ntBASIC16.06■□□□□ 0.16
CCR9P51686 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.06■□□□□ 0.16
CCR9P51686 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 AC084018.2-201ENST00000613093 2607 ntBASIC16.06■□□□□ 0.16
CCR9P51686 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CCR9P51686 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 AC080080.1-201ENST00000625121 2420 ntBASIC16.06■□□□□ 0.16
CCR9P51686 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.06■□□□□ 0.16
CCR9P51686 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
CCR9P51686 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.05■□□□□ 0.16
CCR9P51686 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.05■□□□□ 0.16
CCR9P51686 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.05■□□□□ 0.16
CCR9P51686 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.05■□□□□ 0.16
CCR9P51686 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.05■□□□□ 0.16
CCR9P51686 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCR9P51686 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.05■□□□□ 0.16
CCR9P51686 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCR9P51686 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCR9P51686 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.05■□□□□ 0.16
CCR9P51686 RPPH1-201ENST00000516869 333 ntBASIC16.05■□□□□ 0.16
CCR9P51686 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.05■□□□□ 0.16
CCR9P51686 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.05■□□□□ 0.16
CCR9P51686 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCR9P51686 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCR9P51686 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.05■□□□□ 0.16
CCR9P51686 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR9P51686 AL163051.1-201ENST00000569214 1512 ntBASIC16.04■□□□□ 0.16
CCR9P51686 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.04■□□□□ 0.16
CCR9P51686 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.04■□□□□ 0.16
CCR9P51686 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CCR9P51686 AC009102.3-201ENST00000623118 1491 ntBASIC16.04■□□□□ 0.16
CCR9P51686 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.04■□□□□ 0.16
CCR9P51686 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCR9P51686 SDHAP2-201ENST00000455183 2001 ntBASIC16.04■□□□□ 0.16
CCR9P51686 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCR9P51686 AL135905.2-201ENST00000584934 1404 ntBASIC16.04■□□□□ 0.16
CCR9P51686 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCR9P51686 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCR9P51686 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCR9P51686 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCR9P51686 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCR9P51686 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.04■□□□□ 0.16
CCR9P51686 MIR149-201ENST00000384879 89 ntBASIC16.04■□□□□ 0.16
CCR9P51686 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCR9P51686 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.04■□□□□ 0.16
CCR9P51686 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.04■□□□□ 0.16
CCR9P51686 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CCR9P51686 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCR9P51686 MIR3180-5-201ENST00000583743 153 ntBASIC16.04■□□□□ 0.16
CCR9P51686 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.04■□□□□ 0.16
CCR9P51686 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.04■□□□□ 0.16
CCR9P51686 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCR9P51686 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.04■□□□□ 0.16
CCR9P51686 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCR9P51686 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.04■□□□□ 0.16
CCR9P51686 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCR9P51686 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms