Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HCFC1P51610 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
HCFC1P51610 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.84■□□□□ 0.13
HCFC1P51610 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 ABCD1P5-201ENST00000445663 754 ntBASIC15.84■□□□□ 0.13
HCFC1P51610 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 AC093909.1-201ENST00000504731 1122 ntBASIC15.84■□□□□ 0.13
HCFC1P51610 AC021087.4-201ENST00000563761 564 ntBASIC15.84■□□□□ 0.13
HCFC1P51610 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.84■□□□□ 0.13
HCFC1P51610 AC055717.3-201ENST00000622967 595 ntBASIC15.84■□□□□ 0.13
HCFC1P51610 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
HCFC1P51610 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HCFC1P51610 BX323043.1-201ENST00000641006 1765 ntBASIC15.83■□□□□ 0.13
HCFC1P51610 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.13
HCFC1P51610 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
HCFC1P51610 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HCFC1P51610 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HCFC1P51610 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HCFC1P51610 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HCFC1P51610 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC1P51610 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC1P51610 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC1P51610 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.83■□□□□ 0.12
HCFC1P51610 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HCFC1P51610 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
HCFC1P51610 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.83■□□□□ 0.12
HCFC1P51610 OR7E14P-202ENST00000530490 1290 ntBASIC15.83■□□□□ 0.12
HCFC1P51610 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.83■□□□□ 0.12
HCFC1P51610 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC1P51610 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC1P51610 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HCFC1P51610 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC1P51610 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC1P51610 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.83■□□□□ 0.12
HCFC1P51610 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC1P51610 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC1P51610 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC1P51610 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC1P51610 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HCFC1P51610 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC1P51610 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC1P51610 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC1P51610 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HCFC1P51610 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.82■□□□□ 0.12
HCFC1P51610 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC1P51610 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC1P51610 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.82■□□□□ 0.12
HCFC1P51610 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
HCFC1P51610 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC1P51610 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.82■□□□□ 0.12
HCFC1P51610 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HCFC1P51610 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC1P51610 TP73-AS1-210ENST00000637775 1455 ntBASIC15.82■□□□□ 0.12
HCFC1P51610 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.82■□□□□ 0.12
HCFC1P51610 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC1P51610 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC1P51610 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC1P51610 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.82■□□□□ 0.12
HCFC1P51610 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HCFC1P51610 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.82■□□□□ 0.12
HCFC1P51610 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.82■□□□□ 0.12
HCFC1P51610 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.82■□□□□ 0.12
HCFC1P51610 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.82■□□□□ 0.12
HCFC1P51610 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.82■□□□□ 0.12
HCFC1P51610 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HCFC1P51610 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HCFC1P51610 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.81■□□□□ 0.12
HCFC1P51610 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.81■□□□□ 0.12
HCFC1P51610 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HCFC1P51610 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 RCN1P2-201ENST00000398357 915 ntBASIC15.81■□□□□ 0.12
HCFC1P51610 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.81■□□□□ 0.12
HCFC1P51610 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.81■□□□□ 0.12
HCFC1P51610 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.81■□□□□ 0.12
HCFC1P51610 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.81■□□□□ 0.12
HCFC1P51610 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 AC008735.5-201ENST00000623544 497 ntBASIC15.81■□□□□ 0.12
HCFC1P51610 AC116407.3-201ENST00000623905 1129 ntBASIC15.81■□□□□ 0.12
HCFC1P51610 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HCFC1P51610 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms