Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPT1AP50416 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.13■□□□□ 0.81
CPT1AP50416 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CPT1AP50416 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPT1AP50416 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPT1AP50416 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPT1AP50416 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPT1AP50416 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.13■□□□□ 0.81
CPT1AP50416 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.13■□□□□ 0.81
CPT1AP50416 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPT1AP50416 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPT1AP50416 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPT1AP50416 AC021087.4-201ENST00000563761 564 ntBASIC20.13■□□□□ 0.81
CPT1AP50416 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPT1AP50416 TERC-201ENST00000602385 541 ntBASIC20.13■□□□□ 0.81
CPT1AP50416 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPT1AP50416 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPT1AP50416 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPT1AP50416 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.13■□□□□ 0.81
CPT1AP50416 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPT1AP50416 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPT1AP50416 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPT1AP50416 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.13■□□□□ 0.81
CPT1AP50416 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.12■□□□□ 0.81
CPT1AP50416 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 AL356309.3-201ENST00000624132 1934 ntBASIC20.12■□□□□ 0.81
CPT1AP50416 PMS2P7-201ENST00000506558 1336 ntBASIC20.12■□□□□ 0.81
CPT1AP50416 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.12■□□□□ 0.81
CPT1AP50416 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.12■□□□□ 0.81
CPT1AP50416 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.12■□□□□ 0.81
CPT1AP50416 POLD2P1-201ENST00000511220 997 ntBASIC20.12■□□□□ 0.81
CPT1AP50416 SART3-203ENST00000546611 1184 ntBASIC20.12■□□□□ 0.81
CPT1AP50416 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.12■□□□□ 0.81
CPT1AP50416 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.12■□□□□ 0.81
CPT1AP50416 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.12■□□□□ 0.81
CPT1AP50416 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.12■□□□□ 0.81
CPT1AP50416 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.12■□□□□ 0.81
CPT1AP50416 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
CPT1AP50416 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
CPT1AP50416 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPT1AP50416 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPT1AP50416 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPT1AP50416 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CPT1AP50416 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPT1AP50416 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CPT1AP50416 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CPT1AP50416 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.11■□□□□ 0.81
CPT1AP50416 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPT1AP50416 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPT1AP50416 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPT1AP50416 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.11■□□□□ 0.81
CPT1AP50416 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CPT1AP50416 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.11■□□□□ 0.81
CPT1AP50416 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.11■□□□□ 0.81
CPT1AP50416 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.11■□□□□ 0.81
CPT1AP50416 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.11■□□□□ 0.81
CPT1AP50416 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.11■□□□□ 0.81
CPT1AP50416 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.11■□□□□ 0.81
CPT1AP50416 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.11■□□□□ 0.81
CPT1AP50416 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.11■□□□□ 0.81
CPT1AP50416 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.11■□□□□ 0.81
CPT1AP50416 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPT1AP50416 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPT1AP50416 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPT1AP50416 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPT1AP50416 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPT1AP50416 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.11■□□□□ 0.81
CPT1AP50416 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPT1AP50416 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CPT1AP50416 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
CPT1AP50416 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPT1AP50416 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.1■□□□□ 0.81
CPT1AP50416 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPT1AP50416 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CPT1AP50416 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPT1AP50416 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPT1AP50416 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPT1AP50416 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.1■□□□□ 0.81
CPT1AP50416 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.1■□□□□ 0.81
CPT1AP50416 AC092865.5-201ENST00000545435 363 ntBASIC20.1■□□□□ 0.81
CPT1AP50416 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.1■□□□□ 0.81
CPT1AP50416 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPT1AP50416 AL139288.1-201ENST00000623748 933 ntBASIC20.1■□□□□ 0.81
CPT1AP50416 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
CPT1AP50416 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms