Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.33■□□□□ 0.53
CCNFP41002 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.33■□□□□ 0.53
CCNFP41002 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCNFP41002 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCNFP41002 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCNFP41002 AC092338.2-201ENST00000568827 1415 ntBASIC18.33■□□□□ 0.53
CCNFP41002 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
CCNFP41002 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCNFP41002 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCNFP41002 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCNFP41002 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCNFP41002 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.33■□□□□ 0.52
CCNFP41002 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCNFP41002 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.33■□□□□ 0.52
CCNFP41002 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.33■□□□□ 0.52
CCNFP41002 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCNFP41002 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCNFP41002 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.33■□□□□ 0.52
CCNFP41002 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.33■□□□□ 0.52
CCNFP41002 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.33■□□□□ 0.52
CCNFP41002 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.33■□□□□ 0.52
CCNFP41002 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.33■□□□□ 0.52
CCNFP41002 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCNFP41002 AC010947.1-201ENST00000623454 693 ntBASIC18.33■□□□□ 0.52
CCNFP41002 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCNFP41002 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CCNFP41002 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.33■□□□□ 0.52
CCNFP41002 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCNFP41002 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCNFP41002 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCNFP41002 CYP2D8P-201ENST00000433633 1490 ntBASIC18.33■□□□□ 0.52
CCNFP41002 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCNFP41002 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCNFP41002 PRORSD1P-202ENST00000563365 2154 ntBASIC18.32■□□□□ 0.52
CCNFP41002 KRT8P9-201ENST00000558927 1449 ntBASIC18.32■□□□□ 0.52
CCNFP41002 KRT8P50-201ENST00000562022 1438 ntBASIC18.32■□□□□ 0.52
CCNFP41002 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.32■□□□□ 0.52
CCNFP41002 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCNFP41002 AL645608.8-201ENST00000606034 2086 ntBASIC18.32■□□□□ 0.52
CCNFP41002 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCNFP41002 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCNFP41002 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCNFP41002 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.32■□□□□ 0.52
CCNFP41002 AC012317.2-201ENST00000623305 2251 ntBASIC18.32■□□□□ 0.52
CCNFP41002 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCNFP41002 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
CCNFP41002 AC087499.1-201ENST00000418141 1075 ntBASIC18.32■□□□□ 0.52
CCNFP41002 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.32■□□□□ 0.52
CCNFP41002 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCNFP41002 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCNFP41002 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCNFP41002 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.32■□□□□ 0.52
CCNFP41002 AC006116.8-202ENST00000587620 1550 ntBASIC18.32■□□□□ 0.52
CCNFP41002 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCNFP41002 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCNFP41002 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CCNFP41002 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCNFP41002 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCNFP41002 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.32■□□□□ 0.52
CCNFP41002 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCNFP41002 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCNFP41002 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCNFP41002 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCNFP41002 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCNFP41002 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCNFP41002 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCNFP41002 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCNFP41002 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.31■□□□□ 0.52
CCNFP41002 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCNFP41002 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCNFP41002 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.31■□□□□ 0.52
CCNFP41002 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCNFP41002 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.31■□□□□ 0.52
CCNFP41002 AC007663.1-201ENST00000438948 1240 ntBASIC18.31■□□□□ 0.52
CCNFP41002 MCCD1P1-208ENST00000445732 328 ntBASIC18.31■□□□□ 0.52
CCNFP41002 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.31■□□□□ 0.52
CCNFP41002 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CCNFP41002 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCNFP41002 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.31■□□□□ 0.52
CCNFP41002 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCNFP41002 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.31■□□□□ 0.52
CCNFP41002 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCNFP41002 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCNFP41002 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCNFP41002 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCNFP41002 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCNFP41002 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCNFP41002 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCNFP41002 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
CCNFP41002 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.31■□□□□ 0.52
CCNFP41002 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCNFP41002 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCNFP41002 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCNFP41002 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCNFP41002 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCNFP41002 AL023284.2-201ENST00000405850 579 ntBASIC18.3■□□□□ 0.52
CCNFP41002 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCNFP41002 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.3■□□□□ 0.52
CCNFP41002 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.3■□□□□ 0.52
CCNFP41002 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms