Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RFC3P40938 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC3P40938 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.68■□□□□ 0.26
RFC3P40938 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.68■□□□□ 0.26
RFC3P40938 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC3P40938 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC3P40938 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFC3P40938 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC3P40938 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RFC3P40938 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.67■□□□□ 0.26
RFC3P40938 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC3P40938 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
RFC3P40938 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC3P40938 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC3P40938 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.67■□□□□ 0.26
RFC3P40938 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.67■□□□□ 0.26
RFC3P40938 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC3P40938 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC3P40938 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC3P40938 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC3P40938 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
RFC3P40938 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFC3P40938 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC3P40938 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC3P40938 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.67■□□□□ 0.26
RFC3P40938 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RFC3P40938 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.67■□□□□ 0.26
RFC3P40938 LINC00167-201ENST00000530583 1419 ntBASIC16.67■□□□□ 0.26
RFC3P40938 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RFC3P40938 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
RFC3P40938 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC3P40938 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFC3P40938 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC3P40938 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.66■□□□□ 0.26
RFC3P40938 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.66■□□□□ 0.26
RFC3P40938 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFC3P40938 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.66■□□□□ 0.26
RFC3P40938 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC3P40938 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFC3P40938 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.66■□□□□ 0.26
RFC3P40938 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RFC3P40938 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC3P40938 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC3P40938 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC3P40938 AP000593.1-201ENST00000393668 712 ntBASIC16.66■□□□□ 0.26
RFC3P40938 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFC3P40938 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC3P40938 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.66■□□□□ 0.26
RFC3P40938 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.66■□□□□ 0.26
RFC3P40938 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.66■□□□□ 0.26
RFC3P40938 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC3P40938 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.66■□□□□ 0.26
RFC3P40938 AL691432.3-201ENST00000621860 400 ntBASIC16.66■□□□□ 0.26
RFC3P40938 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.66■□□□□ 0.26
RFC3P40938 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFC3P40938 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RFC3P40938 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC3P40938 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC3P40938 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC3P40938 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFC3P40938 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.66■□□□□ 0.26
RFC3P40938 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.65■□□□□ 0.26
RFC3P40938 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RFC3P40938 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RFC3P40938 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RFC3P40938 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RFC3P40938 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.65■□□□□ 0.26
RFC3P40938 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
RFC3P40938 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.65■□□□□ 0.26
RFC3P40938 DRAXINP1-201ENST00000437611 948 ntBASIC16.65■□□□□ 0.26
RFC3P40938 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RFC3P40938 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.65■□□□□ 0.26
RFC3P40938 KRT18P41-201ENST00000518924 1277 ntBASIC16.65■□□□□ 0.26
RFC3P40938 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.65■□□□□ 0.26
RFC3P40938 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.65■□□□□ 0.26
RFC3P40938 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RFC3P40938 AL732292.2-201ENST00000609649 430 ntBASIC16.65■□□□□ 0.26
RFC3P40938 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RFC3P40938 AC124864.1-201ENST00000623408 392 ntBASIC16.65■□□□□ 0.26
RFC3P40938 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.65■□□□□ 0.26
RFC3P40938 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RFC3P40938 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFC3P40938 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms