Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
HMGCLP35914 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HMGCLP35914 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HMGCLP35914 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HMGCLP35914 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 LINC00167-201ENST00000530583 1419 ntBASIC18.13■□□□□ 0.49
HMGCLP35914 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.13■□□□□ 0.49
HMGCLP35914 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.13■□□□□ 0.49
HMGCLP35914 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HMGCLP35914 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HMGCLP35914 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.12■□□□□ 0.49
HMGCLP35914 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGCLP35914 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGCLP35914 FAM86EP-206ENST00000510506 987 ntBASIC18.12■□□□□ 0.49
HMGCLP35914 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.12■□□□□ 0.49
HMGCLP35914 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGCLP35914 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HMGCLP35914 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 AC132938.6-201ENST00000623828 1655 ntBASIC18.12■□□□□ 0.49
HMGCLP35914 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLP35914 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
HMGCLP35914 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
HMGCLP35914 LINC00602-201ENST00000629776 2065 ntBASIC18.11■□□□□ 0.49
HMGCLP35914 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
HMGCLP35914 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGCLP35914 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGCLP35914 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.11■□□□□ 0.49
HMGCLP35914 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGCLP35914 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGCLP35914 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.11■□□□□ 0.49
HMGCLP35914 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGCLP35914 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HMGCLP35914 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.11■□□□□ 0.49
HMGCLP35914 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.11■□□□□ 0.49
HMGCLP35914 GPR32P1-201ENST00000601788 811 ntBASIC18.11■□□□□ 0.49
HMGCLP35914 AL445228.2-201ENST00000605589 952 ntBASIC18.11■□□□□ 0.49
HMGCLP35914 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.11■□□□□ 0.49
HMGCLP35914 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGCLP35914 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGCLP35914 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGCLP35914 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLP35914 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
HMGCLP35914 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLP35914 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.1■□□□□ 0.49
HMGCLP35914 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLP35914 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
HMGCLP35914 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLP35914 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGCLP35914 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLP35914 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HMGCLP35914 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLP35914 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLP35914 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.1■□□□□ 0.49
HMGCLP35914 AC005332.1-201ENST00000577698 1310 ntBASIC18.1■□□□□ 0.49
HMGCLP35914 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.1■□□□□ 0.49
HMGCLP35914 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.1■□□□□ 0.49
HMGCLP35914 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLP35914 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLP35914 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLP35914 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.1■□□□□ 0.49
HMGCLP35914 DUTP2-201ENST00000519164 463 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms