Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AC083849.1-201ENST00000615227 514 ntBASIC19.24■□□□□ 0.67
CHKAP35790 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.24■□□□□ 0.67
CHKAP35790 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHKAP35790 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CHKAP35790 FZD10-202ENST00000539839 3282 ntBASIC19.24■□□□□ 0.67
CHKAP35790 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHKAP35790 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHKAP35790 AC008764.6-201ENST00000595909 2069 ntBASIC19.24■□□□□ 0.67
CHKAP35790 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHKAP35790 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.24■□□□□ 0.67
CHKAP35790 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHKAP35790 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.24■□□□□ 0.67
CHKAP35790 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHKAP35790 AC005332.1-201ENST00000577698 1310 ntBASIC19.24■□□□□ 0.67
CHKAP35790 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHKAP35790 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHKAP35790 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.23■□□□□ 0.67
CHKAP35790 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.23■□□□□ 0.67
CHKAP35790 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.23■□□□□ 0.67
CHKAP35790 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CHKAP35790 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CHKAP35790 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHKAP35790 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.23■□□□□ 0.67
CHKAP35790 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 UPK3BP1-201ENST00000428678 509 ntBASIC19.23■□□□□ 0.67
CHKAP35790 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.23■□□□□ 0.67
CHKAP35790 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.23■□□□□ 0.67
CHKAP35790 AC104390.1-201ENST00000555663 520 ntBASIC19.23■□□□□ 0.67
CHKAP35790 MIR3917-201ENST00000580971 93 ntBASIC19.23■□□□□ 0.67
CHKAP35790 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.23■□□□□ 0.67
CHKAP35790 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.23■□□□□ 0.67
CHKAP35790 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.23■□□□□ 0.67
CHKAP35790 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.23■□□□□ 0.67
CHKAP35790 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 AL162741.1-201ENST00000565563 1558 ntBASIC19.23■□□□□ 0.67
CHKAP35790 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHKAP35790 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.22■□□□□ 0.67
CHKAP35790 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHKAP35790 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHKAP35790 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHKAP35790 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHKAP35790 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHKAP35790 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHKAP35790 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.22■□□□□ 0.67
CHKAP35790 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.22■□□□□ 0.67
CHKAP35790 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHKAP35790 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHKAP35790 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHKAP35790 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.22■□□□□ 0.67
CHKAP35790 HBZP1-201ENST00000354915 429 ntBASIC19.22■□□□□ 0.67
CHKAP35790 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.22■□□□□ 0.67
CHKAP35790 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHKAP35790 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHKAP35790 AC116407.4-201ENST00000623319 1061 ntBASIC19.22■□□□□ 0.67
CHKAP35790 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CHKAP35790 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHKAP35790 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHKAP35790 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHKAP35790 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHKAP35790 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.22■□□□□ 0.67
CHKAP35790 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHKAP35790 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHKAP35790 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.21■□□□□ 0.67
CHKAP35790 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHKAP35790 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHKAP35790 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHKAP35790 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHKAP35790 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHKAP35790 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHKAP35790 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.21■□□□□ 0.67
CHKAP35790 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CHKAP35790 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.21■□□□□ 0.67
CHKAP35790 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHKAP35790 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.21■□□□□ 0.67
CHKAP35790 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.21■□□□□ 0.67
CHKAP35790 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.21■□□□□ 0.67
CHKAP35790 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHKAP35790 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.21■□□□□ 0.67
CHKAP35790 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.21■□□□□ 0.67
CHKAP35790 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.21■□□□□ 0.67
CHKAP35790 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHKAP35790 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms