Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCK1P35558 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PCK1P35558 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
PCK1P35558 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PCK1P35558 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCK1P35558 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
PCK1P35558 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.19■□□□□ 0.66
PCK1P35558 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.19■□□□□ 0.66
PCK1P35558 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.19■□□□□ 0.66
PCK1P35558 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.19■□□□□ 0.66
PCK1P35558 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.19■□□□□ 0.66
PCK1P35558 NEK4P2-201ENST00000580004 1012 ntBASIC19.19■□□□□ 0.66
PCK1P35558 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.19■□□□□ 0.66
PCK1P35558 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.19■□□□□ 0.66
PCK1P35558 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.19■□□□□ 0.66
PCK1P35558 AC145285.6-201ENST00000604632 637 ntBASIC19.19■□□□□ 0.66
PCK1P35558 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.19■□□□□ 0.66
PCK1P35558 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.19■□□□□ 0.66
PCK1P35558 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.19■□□□□ 0.66
PCK1P35558 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PCK1P35558 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
PCK1P35558 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.19■□□□□ 0.66
PCK1P35558 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCK1P35558 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.18■□□□□ 0.66
PCK1P35558 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.18■□□□□ 0.66
PCK1P35558 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.18■□□□□ 0.66
PCK1P35558 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.18■□□□□ 0.66
PCK1P35558 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.18■□□□□ 0.66
PCK1P35558 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.18■□□□□ 0.66
PCK1P35558 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.18■□□□□ 0.66
PCK1P35558 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 AC087499.1-201ENST00000418141 1075 ntBASIC19.18■□□□□ 0.66
PCK1P35558 AC009947.2-201ENST00000444014 672 ntBASIC19.18■□□□□ 0.66
PCK1P35558 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.18■□□□□ 0.66
PCK1P35558 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.18■□□□□ 0.66
PCK1P35558 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.18■□□□□ 0.66
PCK1P35558 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
PCK1P35558 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.18■□□□□ 0.66
PCK1P35558 AC106820.2-201ENST00000563775 3264 ntBASIC19.18■□□□□ 0.66
PCK1P35558 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.18■□□□□ 0.66
PCK1P35558 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.18■□□□□ 0.66
PCK1P35558 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.18■□□□□ 0.66
PCK1P35558 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.18■□□□□ 0.66
PCK1P35558 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCK1P35558 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCK1P35558 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.17■□□□□ 0.66
PCK1P35558 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.17■□□□□ 0.66
PCK1P35558 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.17■□□□□ 0.66
PCK1P35558 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCK1P35558 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCK1P35558 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCK1P35558 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCK1P35558 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCK1P35558 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCK1P35558 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.17■□□□□ 0.66
PCK1P35558 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
PCK1P35558 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.17■□□□□ 0.66
PCK1P35558 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PCK1P35558 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCK1P35558 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.17■□□□□ 0.66
PCK1P35558 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCK1P35558 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCK1P35558 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms