Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AP000525.1-201ENST00000608286 694 ntBASIC19.96■□□□□ 0.79
KRT9P35527 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
KRT9P35527 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT9P35527 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT9P35527 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.96■□□□□ 0.79
KRT9P35527 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.79
KRT9P35527 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
KRT9P35527 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.95■□□□□ 0.78
KRT9P35527 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.95■□□□□ 0.78
KRT9P35527 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 GPAT2P1-201ENST00000444924 1672 ntBASIC19.95■□□□□ 0.78
KRT9P35527 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.95■□□□□ 0.78
KRT9P35527 AL355075.4-201ENST00000554988 638 ntBASIC19.95■□□□□ 0.78
KRT9P35527 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.95■□□□□ 0.78
KRT9P35527 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.95■□□□□ 0.78
KRT9P35527 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.95■□□□□ 0.78
KRT9P35527 AC139713.2-201ENST00000641328 2723 ntBASIC19.95■□□□□ 0.78
KRT9P35527 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.95■□□□□ 0.78
KRT9P35527 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT9P35527 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT9P35527 AC034236.2-201ENST00000606662 1610 ntBASIC19.94■□□□□ 0.78
KRT9P35527 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
KRT9P35527 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT9P35527 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT9P35527 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
KRT9P35527 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT9P35527 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT9P35527 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT9P35527 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
KRT9P35527 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT9P35527 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT9P35527 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT9P35527 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT9P35527 MIR1238-201ENST00000408483 83 ntBASIC19.94■□□□□ 0.78
KRT9P35527 MCCD1P1-208ENST00000445732 328 ntBASIC19.94■□□□□ 0.78
KRT9P35527 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT9P35527 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.94■□□□□ 0.78
KRT9P35527 FITM1-202ENST00000559294 800 ntBASIC19.94■□□□□ 0.78
KRT9P35527 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
KRT9P35527 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
KRT9P35527 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
KRT9P35527 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT9P35527 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT9P35527 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT9P35527 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT9P35527 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT9P35527 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
KRT9P35527 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT9P35527 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT9P35527 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT9P35527 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
KRT9P35527 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT9P35527 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT9P35527 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT9P35527 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
KRT9P35527 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT9P35527 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT9P35527 AC093827.2-201ENST00000512654 315 ntBASIC19.93■□□□□ 0.78
KRT9P35527 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
KRT9P35527 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
KRT9P35527 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT9P35527 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
KRT9P35527 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT9P35527 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT9P35527 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT9P35527 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT9P35527 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT9P35527 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT9P35527 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT9P35527 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
KRT9P35527 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT9P35527 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT9P35527 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT9P35527 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms