Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXA13P31271 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXA13P31271 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXA13P31271 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA13P31271 AC068472.1-201ENST00000474589 881 ntBASIC20.7■□□□□ 0.9
HOXA13P31271 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXA13P31271 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA13P31271 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXA13P31271 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.7■□□□□ 0.9
HOXA13P31271 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXA13P31271 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXA13P31271 AC099336.1-202ENST00000602961 463 ntBASIC20.7■□□□□ 0.9
HOXA13P31271 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.7■□□□□ 0.9
HOXA13P31271 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXA13P31271 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
HOXA13P31271 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA13P31271 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA13P31271 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HOXA13P31271 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HOXA13P31271 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA13P31271 NSUN5P1-202ENST00000421140 1535 ntBASIC20.69■□□□□ 0.9
HOXA13P31271 NSUN5P2-203ENST00000457352 1529 ntBASIC20.69■□□□□ 0.9
HOXA13P31271 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
HOXA13P31271 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
HOXA13P31271 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA13P31271 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA13P31271 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
HOXA13P31271 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXA13P31271 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXA13P31271 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXA13P31271 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA13P31271 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA13P31271 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA13P31271 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA13P31271 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA13P31271 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA13P31271 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXA13P31271 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA13P31271 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA13P31271 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA13P31271 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA13P31271 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HOXA13P31271 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HOXA13P31271 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA13P31271 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA13P31271 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA13P31271 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXA13P31271 PHGDH-209ENST00000641074 1780 ntBASIC20.68■□□□□ 0.9
HOXA13P31271 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA13P31271 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXA13P31271 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA13P31271 TSPY19P-201ENST00000418461 509 ntBASIC20.68■□□□□ 0.9
HOXA13P31271 TSPY18P-201ENST00000441642 509 ntBASIC20.68■□□□□ 0.9
HOXA13P31271 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXA13P31271 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXA13P31271 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXA13P31271 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.68■□□□□ 0.9
HOXA13P31271 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.68■□□□□ 0.9
HOXA13P31271 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXA13P31271 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXA13P31271 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA13P31271 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA13P31271 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA13P31271 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXA13P31271 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA13P31271 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HOXA13P31271 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA13P31271 AC132938.6-201ENST00000623828 1655 ntBASIC20.67■□□□□ 0.9
HOXA13P31271 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXA13P31271 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA13P31271 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA13P31271 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXA13P31271 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 VENTXP7-201ENST00000475503 772 ntBASIC20.67■□□□□ 0.9
HOXA13P31271 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.67■□□□□ 0.9
HOXA13P31271 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HOXA13P31271 AL353801.3-201ENST00000609898 542 ntBASIC20.67■□□□□ 0.9
HOXA13P31271 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXA13P31271 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA13P31271 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA13P31271 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA13P31271 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXA13P31271 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA13P31271 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXA13P31271 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms