Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN3P26045 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN3P26045 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.59■□□□□ 0.57
PTPN3P26045 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PTPN3P26045 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.59■□□□□ 0.57
PTPN3P26045 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PTPN3P26045 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN3P26045 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN3P26045 AC139887.4-201ENST00000607877 719 ntBASIC18.59■□□□□ 0.57
PTPN3P26045 AC011558.1-201ENST00000623459 338 ntBASIC18.59■□□□□ 0.57
PTPN3P26045 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN3P26045 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN3P26045 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN3P26045 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.58■□□□□ 0.57
PTPN3P26045 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PTPN3P26045 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PTPN3P26045 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.58■□□□□ 0.57
PTPN3P26045 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN3P26045 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN3P26045 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.58■□□□□ 0.57
PTPN3P26045 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN3P26045 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN3P26045 BX664615.1-201ENST00000443558 458 ntBASIC18.58■□□□□ 0.56
PTPN3P26045 AC034232.1-201ENST00000506026 1064 ntBASIC18.58■□□□□ 0.56
PTPN3P26045 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
PTPN3P26045 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN3P26045 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN3P26045 LINC01023-201ENST00000606054 436 ntBASIC18.58■□□□□ 0.56
PTPN3P26045 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PTPN3P26045 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PTPN3P26045 AL031432.5-201ENST00000641059 760 ntBASIC18.58■□□□□ 0.56
PTPN3P26045 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN3P26045 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPN3P26045 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
PTPN3P26045 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN3P26045 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN3P26045 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN3P26045 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN3P26045 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN3P26045 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN3P26045 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN3P26045 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PTPN3P26045 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN3P26045 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
PTPN3P26045 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN3P26045 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN3P26045 AP000997.3-201ENST00000623333 2250 ntBASIC18.57■□□□□ 0.56
PTPN3P26045 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN3P26045 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.57■□□□□ 0.56
PTPN3P26045 AC117947.1-201ENST00000427448 529 ntBASIC18.57■□□□□ 0.56
PTPN3P26045 KRT18P57-201ENST00000443599 1254 ntBASIC18.57■□□□□ 0.56
PTPN3P26045 RASA4DP-201ENST00000460726 1199 ntBASIC18.57■□□□□ 0.56
PTPN3P26045 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN3P26045 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PTPN3P26045 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PTPN3P26045 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTPN3P26045 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN3P26045 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN3P26045 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN3P26045 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN3P26045 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPN3P26045 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN3P26045 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PTPN3P26045 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms