Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMA1P25391 LINC00602-201ENST00000629776 2065 ntBASIC17.76■□□□□ 0.43
LAMA1P25391 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.76■□□□□ 0.43
LAMA1P25391 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMA1P25391 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LAMA1P25391 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
LAMA1P25391 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LAMA1P25391 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
LAMA1P25391 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LAMA1P25391 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
LAMA1P25391 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LAMA1P25391 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.75■□□□□ 0.43
LAMA1P25391 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.75■□□□□ 0.43
LAMA1P25391 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.75■□□□□ 0.43
LAMA1P25391 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.75■□□□□ 0.43
LAMA1P25391 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LAMA1P25391 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.75■□□□□ 0.43
LAMA1P25391 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LAMA1P25391 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMA1P25391 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMA1P25391 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LAMA1P25391 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LAMA1P25391 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMA1P25391 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMA1P25391 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
LAMA1P25391 ABCD1P5-201ENST00000445663 754 ntBASIC17.75■□□□□ 0.43
LAMA1P25391 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.75■□□□□ 0.43
LAMA1P25391 MTDHP4-201ENST00000600287 670 ntBASIC17.75■□□□□ 0.43
LAMA1P25391 AC008735.5-201ENST00000623544 497 ntBASIC17.75■□□□□ 0.43
LAMA1P25391 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.75■□□□□ 0.43
LAMA1P25391 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMA1P25391 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMA1P25391 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LAMA1P25391 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
LAMA1P25391 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LAMA1P25391 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.75■□□□□ 0.43
LAMA1P25391 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LAMA1P25391 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
LAMA1P25391 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.75■□□□□ 0.43
LAMA1P25391 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LAMA1P25391 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.75■□□□□ 0.43
LAMA1P25391 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LAMA1P25391 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.75■□□□□ 0.43
LAMA1P25391 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.75■□□□□ 0.43
LAMA1P25391 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
LAMA1P25391 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LAMA1P25391 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.75■□□□□ 0.43
LAMA1P25391 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.75■□□□□ 0.43
LAMA1P25391 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LAMA1P25391 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMA1P25391 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.75■□□□□ 0.43
LAMA1P25391 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.74■□□□□ 0.43
LAMA1P25391 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LAMA1P25391 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
LAMA1P25391 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMA1P25391 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.74■□□□□ 0.43
LAMA1P25391 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.74■□□□□ 0.43
LAMA1P25391 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.74■□□□□ 0.43
LAMA1P25391 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.74■□□□□ 0.43
LAMA1P25391 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LAMA1P25391 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMA1P25391 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMA1P25391 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMA1P25391 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LAMA1P25391 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LAMA1P25391 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.74■□□□□ 0.43
LAMA1P25391 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LAMA1P25391 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.74■□□□□ 0.43
LAMA1P25391 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMA1P25391 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMA1P25391 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMA1P25391 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMA1P25391 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.73■□□□□ 0.43
LAMA1P25391 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 FAM8A3P-201ENST00000427218 844 ntBASIC17.73■□□□□ 0.43
LAMA1P25391 ALG1L5P-201ENST00000482043 771 ntBASIC17.73■□□□□ 0.43
LAMA1P25391 AC011467.2-201ENST00000598425 242 ntBASIC17.73■□□□□ 0.43
LAMA1P25391 AL161938.1-201ENST00000569833 2180 ntBASIC17.73■□□□□ 0.43
LAMA1P25391 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LAMA1P25391 SPCS2P1-201ENST00000561636 679 ntBASIC17.73■□□□□ 0.43
LAMA1P25391 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.73■□□□□ 0.43
LAMA1P25391 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.73■□□□□ 0.43
LAMA1P25391 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LAMA1P25391 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LAMA1P25391 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.73■□□□□ 0.43
LAMA1P25391 AC068472.1-201ENST00000474589 881 ntBASIC17.73■□□□□ 0.43
LAMA1P25391 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms