Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CCND1P24385 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCND1P24385 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCND1P24385 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCND1P24385 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCND1P24385 AC018695.7-201ENST00000624587 2492 ntBASIC18.37■□□□□ 0.53
CCND1P24385 UNC93B2-201ENST00000285383 730 ntBASIC18.37■□□□□ 0.53
CCND1P24385 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.37■□□□□ 0.53
CCND1P24385 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.37■□□□□ 0.53
CCND1P24385 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.37■□□□□ 0.53
CCND1P24385 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.37■□□□□ 0.53
CCND1P24385 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCND1P24385 MIR4497-201ENST00000583208 89 ntBASIC18.37■□□□□ 0.53
CCND1P24385 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.37■□□□□ 0.53
CCND1P24385 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
CCND1P24385 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCND1P24385 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCND1P24385 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCND1P24385 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.37■□□□□ 0.53
CCND1P24385 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.37■□□□□ 0.53
CCND1P24385 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCND1P24385 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCND1P24385 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCND1P24385 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCND1P24385 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCND1P24385 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.37■□□□□ 0.53
CCND1P24385 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCND1P24385 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.37■□□□□ 0.53
CCND1P24385 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CCND1P24385 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCND1P24385 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCND1P24385 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCND1P24385 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCND1P24385 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCND1P24385 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCND1P24385 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
CCND1P24385 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CCND1P24385 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.36■□□□□ 0.53
CCND1P24385 TSPY7P-201ENST00000431358 1114 ntBASIC18.36■□□□□ 0.53
CCND1P24385 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCND1P24385 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.36■□□□□ 0.53
CCND1P24385 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCND1P24385 SNORA78-201ENST00000459373 127 ntBASIC18.36■□□□□ 0.53
CCND1P24385 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CCND1P24385 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.36■□□□□ 0.53
CCND1P24385 AC097488.1-201ENST00000507834 756 ntBASIC18.36■□□□□ 0.53
CCND1P24385 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCND1P24385 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCND1P24385 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.36■□□□□ 0.53
CCND1P24385 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.36■□□□□ 0.53
CCND1P24385 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCND1P24385 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.36■□□□□ 0.53
CCND1P24385 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.36■□□□□ 0.53
CCND1P24385 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.36■□□□□ 0.53
CCND1P24385 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.36■□□□□ 0.53
CCND1P24385 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.36■□□□□ 0.53
CCND1P24385 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCND1P24385 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCND1P24385 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.35■□□□□ 0.53
CCND1P24385 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.35■□□□□ 0.53
CCND1P24385 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.35■□□□□ 0.53
CCND1P24385 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCND1P24385 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.35■□□□□ 0.53
CCND1P24385 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.35■□□□□ 0.53
CCND1P24385 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.35■□□□□ 0.53
CCND1P24385 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.35■□□□□ 0.53
CCND1P24385 SLC25A1P4-201ENST00000567977 778 ntBASIC18.35■□□□□ 0.53
CCND1P24385 AP005242.2-201ENST00000580065 1175 ntBASIC18.35■□□□□ 0.53
CCND1P24385 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.35■□□□□ 0.53
CCND1P24385 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCND1P24385 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.34■□□□□ 0.53
CCND1P24385 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.34■□□□□ 0.53
CCND1P24385 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.34■□□□□ 0.53
CCND1P24385 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.34■□□□□ 0.53
CCND1P24385 AC108860.2-201ENST00000562760 2183 ntBASIC18.34■□□□□ 0.53
CCND1P24385 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CCND1P24385 KRT8P3-201ENST00000519669 1449 ntBASIC18.34■□□□□ 0.53
CCND1P24385 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.34■□□□□ 0.53
CCND1P24385 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms