Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.56■□□□□ 0.4
CAPN3P20807 MIR564-202ENST00000385049 94 ntBASIC17.56■□□□□ 0.4
CAPN3P20807 AP000593.1-201ENST00000393668 712 ntBASIC17.56■□□□□ 0.4
CAPN3P20807 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.56■□□□□ 0.4
CAPN3P20807 AL353807.1-201ENST00000427475 662 ntBASIC17.56■□□□□ 0.4
CAPN3P20807 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
CAPN3P20807 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CAPN3P20807 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.56■□□□□ 0.4
CAPN3P20807 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.56■□□□□ 0.4
CAPN3P20807 AC026271.3-201ENST00000571884 352 ntBASIC17.56■□□□□ 0.4
CAPN3P20807 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CAPN3P20807 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CAPN3P20807 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CAPN3P20807 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.56■□□□□ 0.4
CAPN3P20807 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 PRORSD1P-202ENST00000563365 2154 ntBASIC17.56■□□□□ 0.4
CAPN3P20807 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CAPN3P20807 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.56■□□□□ 0.4
CAPN3P20807 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CAPN3P20807 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.56■□□□□ 0.4
CAPN3P20807 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.56■□□□□ 0.4
CAPN3P20807 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN3P20807 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CAPN3P20807 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.55■□□□□ 0.4
CAPN3P20807 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.55■□□□□ 0.4
CAPN3P20807 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN3P20807 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CAPN3P20807 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN3P20807 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN3P20807 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN3P20807 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN3P20807 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN3P20807 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
CAPN3P20807 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN3P20807 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CAPN3P20807 FAM207BP-201ENST00000447172 505 ntBASIC17.55■□□□□ 0.4
CAPN3P20807 AC011506.1-201ENST00000474329 610 ntBASIC17.55■□□□□ 0.4
CAPN3P20807 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.55■□□□□ 0.4
CAPN3P20807 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.55■□□□□ 0.4
CAPN3P20807 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CAPN3P20807 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.55■□□□□ 0.4
CAPN3P20807 AC130371.2-201ENST00000619443 611 ntBASIC17.55■□□□□ 0.4
CAPN3P20807 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CAPN3P20807 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN3P20807 AC009053.2-201ENST00000563701 2365 ntBASIC17.55■□□□□ 0.4
CAPN3P20807 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CAPN3P20807 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.55■□□□□ 0.4
CAPN3P20807 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.55■□□□□ 0.4
CAPN3P20807 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN3P20807 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.55■□□□□ 0.4
CAPN3P20807 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN3P20807 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.55■□□□□ 0.4
CAPN3P20807 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN3P20807 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN3P20807 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 SIRPAP1-201ENST00000448467 1770 ntBASIC17.54■□□□□ 0.4
CAPN3P20807 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CAPN3P20807 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 AL023284.2-201ENST00000405850 579 ntBASIC17.54■□□□□ 0.4
CAPN3P20807 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.54■□□□□ 0.4
CAPN3P20807 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CAPN3P20807 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CAPN3P20807 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CAPN3P20807 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.54■□□□□ 0.4
CAPN3P20807 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.54■□□□□ 0.4
CAPN3P20807 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN3P20807 AC080080.1-201ENST00000625121 2420 ntBASIC17.53■□□□□ 0.4
CAPN3P20807 AC006116.8-202ENST00000587620 1550 ntBASIC17.53■□□□□ 0.4
CAPN3P20807 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN3P20807 AC108860.2-201ENST00000562760 2183 ntBASIC17.53■□□□□ 0.4
CAPN3P20807 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CAPN3P20807 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN3P20807 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN3P20807 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CAPN3P20807 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN3P20807 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN3P20807 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN3P20807 GPAT2P1-201ENST00000444924 1672 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms