Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 AL163051.1-201ENST00000569214 1512 ntBASIC16.95■□□□□ 0.3
TNFRSF1BP20333 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 AL645608.8-201ENST00000606034 2086 ntBASIC16.95■□□□□ 0.3
TNFRSF1BP20333 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.95■□□□□ 0.3
TNFRSF1BP20333 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 CRYGFP-201ENST00000418459 633 ntBASIC16.94■□□□□ 0.3
TNFRSF1BP20333 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 TSPY20P-201ENST00000450910 630 ntBASIC16.94■□□□□ 0.3
TNFRSF1BP20333 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 DGCR10-201ENST00000609839 495 ntBASIC16.94■□□□□ 0.3
TNFRSF1BP20333 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF1BP20333 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 AC009102.3-201ENST00000623118 1491 ntBASIC16.93■□□□□ 0.3
TNFRSF1BP20333 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 PRORSD1P-201ENST00000295112 541 ntBASIC16.93■□□□□ 0.3
TNFRSF1BP20333 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 KRT18P29-201ENST00000397031 1267 ntBASIC16.93■□□□□ 0.3
TNFRSF1BP20333 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 FAM201B-201ENST00000458407 597 ntBASIC16.93■□□□□ 0.3
TNFRSF1BP20333 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF1BP20333 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.92■□□□□ 0.3
TNFRSF1BP20333 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TNFRSF1BP20333 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms