Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
ERCC3P19447 AC011840.4-201ENST00000578471 627 ntBASIC21.06■□□□□ 0.96
ERCC3P19447 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.06■□□□□ 0.96
ERCC3P19447 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC3P19447 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ERCC3P19447 AC004263.2-201ENST00000617183 678 ntBASIC21.06■□□□□ 0.96
ERCC3P19447 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC3P19447 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC3P19447 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.06■□□□□ 0.96
ERCC3P19447 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC3P19447 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC3P19447 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC3P19447 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC3P19447 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC3P19447 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ERCC3P19447 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC3P19447 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC3P19447 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC3P19447 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ERCC3P19447 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
ERCC3P19447 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
ERCC3P19447 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.05■□□□□ 0.96
ERCC3P19447 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.05■□□□□ 0.96
ERCC3P19447 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.05■□□□□ 0.96
ERCC3P19447 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ERCC3P19447 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC3P19447 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.05■□□□□ 0.96
ERCC3P19447 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC3P19447 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC3P19447 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC3P19447 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.05■□□□□ 0.96
ERCC3P19447 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC3P19447 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.05■□□□□ 0.96
ERCC3P19447 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.05■□□□□ 0.96
ERCC3P19447 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.05■□□□□ 0.96
ERCC3P19447 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.05■□□□□ 0.96
ERCC3P19447 KRT18P41-201ENST00000518924 1277 ntBASIC21.05■□□□□ 0.96
ERCC3P19447 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.05■□□□□ 0.96
ERCC3P19447 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.05■□□□□ 0.96
ERCC3P19447 REXO1L6P-202ENST00000619970 1078 ntBASIC21.05■□□□□ 0.96
ERCC3P19447 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ERCC3P19447 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ERCC3P19447 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC3P19447 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC3P19447 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC3P19447 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC3P19447 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC3P19447 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC3P19447 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC3P19447 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC3P19447 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.04■□□□□ 0.96
ERCC3P19447 SAPCD2P3-201ENST00000455031 850 ntBASIC21.04■□□□□ 0.96
ERCC3P19447 MINOS1P3-201ENST00000457048 203 ntBASIC21.04■□□□□ 0.96
ERCC3P19447 AF238378.1-201ENST00000526806 358 ntBASIC21.04■□□□□ 0.96
ERCC3P19447 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.04■□□□□ 0.96
ERCC3P19447 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
ERCC3P19447 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.04■□□□□ 0.96
ERCC3P19447 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.04■□□□□ 0.96
ERCC3P19447 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC3P19447 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC3P19447 BX323043.1-201ENST00000641006 1765 ntBASIC21.04■□□□□ 0.96
ERCC3P19447 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC3P19447 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ERCC3P19447 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
ERCC3P19447 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ERCC3P19447 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC3P19447 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC3P19447 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC3P19447 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC3P19447 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
ERCC3P19447 HLA-A-201ENST00000376802 1334 ntBASIC21.04■□□□□ 0.96
ERCC3P19447 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC3P19447 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC3P19447 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.03■□□□□ 0.96
ERCC3P19447 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC3P19447 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC3P19447 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC3P19447 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC3P19447 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ERCC3P19447 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC3P19447 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.03■□□□□ 0.96
ERCC3P19447 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC3P19447 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC3P19447 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ERCC3P19447 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC3P19447 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC3P19447 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
ERCC3P19447 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC3P19447 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.03■□□□□ 0.96
ERCC3P19447 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC3P19447 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.03■□□□□ 0.96
ERCC3P19447 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC3P19447 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ERCC3P19447 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC3P19447 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC3P19447 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ERCC3P19447 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC3P19447 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC3P19447 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.02■□□□□ 0.96
ERCC3P19447 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms