Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.75■□□□□ 0.59
ERCC2P18074 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC2P18074 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC2P18074 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.75■□□□□ 0.59
ERCC2P18074 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC2P18074 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC2P18074 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC2P18074 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.75■□□□□ 0.59
ERCC2P18074 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.75■□□□□ 0.59
ERCC2P18074 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.75■□□□□ 0.59
ERCC2P18074 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
ERCC2P18074 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.75■□□□□ 0.59
ERCC2P18074 AC024563.2-201ENST00000603282 481 ntBASIC18.75■□□□□ 0.59
ERCC2P18074 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.75■□□□□ 0.59
ERCC2P18074 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC2P18074 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC2P18074 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC2P18074 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC2P18074 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC2P18074 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.75■□□□□ 0.59
ERCC2P18074 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC2P18074 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC2P18074 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC2P18074 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ERCC2P18074 NOC2LP1-202ENST00000452600 2235 ntBASIC18.74■□□□□ 0.59
ERCC2P18074 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.74■□□□□ 0.59
ERCC2P18074 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
ERCC2P18074 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.74■□□□□ 0.59
ERCC2P18074 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC2P18074 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC2P18074 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC2P18074 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC2P18074 HBZP1-201ENST00000354915 429 ntBASIC18.74■□□□□ 0.59
ERCC2P18074 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.74■□□□□ 0.59
ERCC2P18074 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.74■□□□□ 0.59
ERCC2P18074 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ERCC2P18074 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC2P18074 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC2P18074 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.74■□□□□ 0.59
ERCC2P18074 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC2P18074 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC2P18074 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.73■□□□□ 0.59
ERCC2P18074 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC2P18074 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.73■□□□□ 0.59
ERCC2P18074 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC2P18074 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC2P18074 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC2P18074 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC2P18074 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC2P18074 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC2P18074 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC2P18074 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.73■□□□□ 0.59
ERCC2P18074 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.73■□□□□ 0.59
ERCC2P18074 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.73■□□□□ 0.59
ERCC2P18074 AC008687.5-201ENST00000593746 558 ntBASIC18.73■□□□□ 0.59
ERCC2P18074 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
ERCC2P18074 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.73■□□□□ 0.59
ERCC2P18074 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ERCC2P18074 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC2P18074 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC2P18074 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ERCC2P18074 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC2P18074 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC2P18074 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ERCC2P18074 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ERCC2P18074 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ERCC2P18074 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.72■□□□□ 0.59
ERCC2P18074 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
ERCC2P18074 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.72■□□□□ 0.59
ERCC2P18074 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ERCC2P18074 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.72■□□□□ 0.59
ERCC2P18074 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.72■□□□□ 0.59
ERCC2P18074 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.72■□□□□ 0.59
ERCC2P18074 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.72■□□□□ 0.59
ERCC2P18074 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.72■□□□□ 0.59
ERCC2P18074 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.72■□□□□ 0.59
ERCC2P18074 LINC01238-205ENST00000567549 1107 ntBASIC18.72■□□□□ 0.59
ERCC2P18074 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.72■□□□□ 0.59
ERCC2P18074 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.72■□□□□ 0.59
ERCC2P18074 AC018470.1-201ENST00000624790 3129 ntBASIC18.72■□□□□ 0.59
ERCC2P18074 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms