Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.18■■□□□ 1.14
COL11A2P13942 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC22.18■■□□□ 1.14
COL11A2P13942 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL11A2P13942 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL11A2P13942 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.18■■□□□ 1.14
COL11A2P13942 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC22.17■■□□□ 1.14
COL11A2P13942 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL11A2P13942 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL11A2P13942 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL11A2P13942 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL11A2P13942 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL11A2P13942 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.17■■□□□ 1.14
COL11A2P13942 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC22.17■■□□□ 1.14
COL11A2P13942 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
COL11A2P13942 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
COL11A2P13942 COX5A-206ENST00000568783 571 ntTSL 3 BASIC22.17■■□□□ 1.14
COL11A2P13942 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC22.17■■□□□ 1.14
COL11A2P13942 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
COL11A2P13942 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL11A2P13942 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.17■■□□□ 1.14
COL11A2P13942 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL11A2P13942 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC22.17■■□□□ 1.14
COL11A2P13942 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL11A2P13942 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL11A2P13942 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.17■■□□□ 1.14
COL11A2P13942 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.17■■□□□ 1.14
COL11A2P13942 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.17■■□□□ 1.14
COL11A2P13942 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL11A2P13942 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL11A2P13942 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL11A2P13942 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
COL11A2P13942 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC22.17■■□□□ 1.14
COL11A2P13942 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
COL11A2P13942 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.17■■□□□ 1.14
COL11A2P13942 ATP6V0CP3-201ENST00000417255 467 ntBASIC22.17■■□□□ 1.14
COL11A2P13942 AC254562.1-201ENST00000417586 456 ntBASIC22.17■■□□□ 1.14
COL11A2P13942 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC22.17■■□□□ 1.14
COL11A2P13942 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC22.17■■□□□ 1.14
COL11A2P13942 AL078644.1-201ENST00000609881 752 ntBASIC22.17■■□□□ 1.14
COL11A2P13942 AD001527.2-201ENST00000622994 785 ntBASIC22.17■■□□□ 1.14
COL11A2P13942 AC092865.6-201ENST00000642101 219 ntBASIC22.17■■□□□ 1.14
COL11A2P13942 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL11A2P13942 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL11A2P13942 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.16■■□□□ 1.14
COL11A2P13942 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL11A2P13942 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL11A2P13942 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.16■■□□□ 1.14
COL11A2P13942 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
COL11A2P13942 AC097374.2-201ENST00000618617 1306 ntBASIC22.16■■□□□ 1.14
COL11A2P13942 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL11A2P13942 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.16■■□□□ 1.14
COL11A2P13942 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL11A2P13942 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
COL11A2P13942 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.16■■□□□ 1.14
COL11A2P13942 AL022326.1-202ENST00000641533 845 ntBASIC22.16■■□□□ 1.14
COL11A2P13942 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
COL11A2P13942 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL11A2P13942 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.16■■□□□ 1.14
COL11A2P13942 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL11A2P13942 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL11A2P13942 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
COL11A2P13942 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.15■■□□□ 1.14
COL11A2P13942 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL11A2P13942 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
COL11A2P13942 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL11A2P13942 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL11A2P13942 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL11A2P13942 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC22.15■■□□□ 1.14
COL11A2P13942 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC22.15■■□□□ 1.14
COL11A2P13942 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC22.15■■□□□ 1.14
COL11A2P13942 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.15■■□□□ 1.14
COL11A2P13942 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC22.15■■□□□ 1.14
COL11A2P13942 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.15■■□□□ 1.14
COL11A2P13942 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC22.15■■□□□ 1.14
COL11A2P13942 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
COL11A2P13942 AL513190.1-201ENST00000621254 727 ntBASIC22.15■■□□□ 1.14
COL11A2P13942 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
COL11A2P13942 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL11A2P13942 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC22.15■■□□□ 1.14
COL11A2P13942 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL11A2P13942 AC004817.3-201ENST00000602957 2129 ntBASIC22.15■■□□□ 1.14
COL11A2P13942 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL11A2P13942 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.15■■□□□ 1.14
COL11A2P13942 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.15■■□□□ 1.14
COL11A2P13942 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.14
COL11A2P13942 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC22.14■■□□□ 1.14
COL11A2P13942 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.14■■□□□ 1.14
COL11A2P13942 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC22.14■■□□□ 1.14
COL11A2P13942 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC22.14■■□□□ 1.14
COL11A2P13942 TCAP-202ENST00000578283 583 ntTSL 5 BASIC22.14■■□□□ 1.14
COL11A2P13942 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.14■■□□□ 1.14
COL11A2P13942 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
COL11A2P13942 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
COL11A2P13942 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL11A2P13942 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL11A2P13942 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
COL11A2P13942 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.14■■□□□ 1.13
COL11A2P13942 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
COL11A2P13942 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC22.14■■□□□ 1.13
COL11A2P13942 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms