Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.37■□□□□ 0.53
SRFP11831 MIR3197-201ENST00000582241 73 ntBASIC18.37■□□□□ 0.53
SRFP11831 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.37■□□□□ 0.53
SRFP11831 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.37■□□□□ 0.53
SRFP11831 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRFP11831 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFP11831 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFP11831 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.37■□□□□ 0.53
SRFP11831 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.37■□□□□ 0.53
SRFP11831 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFP11831 LINC01126-201ENST00000623515 1646 ntBASIC18.37■□□□□ 0.53
SRFP11831 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.37■□□□□ 0.53
SRFP11831 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFP11831 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFP11831 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFP11831 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFP11831 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFP11831 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.37■□□□□ 0.53
SRFP11831 AL032819.2-201ENST00000624543 2162 ntBASIC18.37■□□□□ 0.53
SRFP11831 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.37■□□□□ 0.53
SRFP11831 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SRFP11831 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.37■□□□□ 0.53
SRFP11831 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.37■□□□□ 0.53
SRFP11831 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SRFP11831 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SRFP11831 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFP11831 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRFP11831 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SRFP11831 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRFP11831 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFP11831 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFP11831 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFP11831 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFP11831 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFP11831 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.36■□□□□ 0.53
SRFP11831 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.36■□□□□ 0.53
SRFP11831 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRFP11831 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.36■□□□□ 0.53
SRFP11831 CYMP-203ENST00000474680 1263 ntBASIC18.36■□□□□ 0.53
SRFP11831 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.36■□□□□ 0.53
SRFP11831 YBX1P5-201ENST00000509441 847 ntBASIC18.36■□□□□ 0.53
SRFP11831 AC136632.2-201ENST00000512891 861 ntBASIC18.36■□□□□ 0.53
SRFP11831 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFP11831 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRFP11831 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFP11831 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.36■□□□□ 0.53
SRFP11831 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.36■□□□□ 0.53
SRFP11831 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SRFP11831 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRFP11831 AC073592.4-201ENST00000623827 446 ntBASIC18.36■□□□□ 0.53
SRFP11831 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.36■□□□□ 0.53
SRFP11831 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.36■□□□□ 0.53
SRFP11831 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
SRFP11831 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SRFP11831 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.35■□□□□ 0.53
SRFP11831 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRFP11831 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRFP11831 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRFP11831 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.35■□□□□ 0.53
SRFP11831 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRFP11831 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SRFP11831 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.35■□□□□ 0.53
SRFP11831 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRFP11831 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRFP11831 AC097374.2-201ENST00000618617 1306 ntBASIC18.35■□□□□ 0.53
SRFP11831 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRFP11831 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.35■□□□□ 0.53
SRFP11831 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRFP11831 AC073621.1-201ENST00000392730 636 ntBASIC18.35■□□□□ 0.53
SRFP11831 RFPL4AP1-201ENST00000530883 850 ntBASIC18.35■□□□□ 0.53
SRFP11831 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.35■□□□□ 0.53
SRFP11831 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
SRFP11831 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.35■□□□□ 0.53
SRFP11831 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.35■□□□□ 0.53
SRFP11831 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SRFP11831 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.35■□□□□ 0.53
SRFP11831 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRFP11831 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRFP11831 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRFP11831 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRFP11831 PMPCAP1-201ENST00000508114 1576 ntBASIC18.34■□□□□ 0.53
SRFP11831 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRFP11831 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRFP11831 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.34■□□□□ 0.53
SRFP11831 AC002310.6-201ENST00000624451 1377 ntBASIC18.34■□□□□ 0.53
SRFP11831 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SRFP11831 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRFP11831 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRFP11831 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRFP11831 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRFP11831 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.34■□□□□ 0.53
SRFP11831 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.34■□□□□ 0.53
SRFP11831 AC254562.1-201ENST00000417586 456 ntBASIC18.34■□□□□ 0.53
SRFP11831 AC007967.3-201ENST00000434308 558 ntBASIC18.34■□□□□ 0.53
SRFP11831 PRYP5-201ENST00000451909 266 ntBASIC18.34■□□□□ 0.53
SRFP11831 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.34■□□□□ 0.53
SRFP11831 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SRFP11831 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRFP11831 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.34■□□□□ 0.53
SRFP11831 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms