Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LAMP1P11279 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LAMP1P11279 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LAMP1P11279 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LAMP1P11279 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LAMP1P11279 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
LAMP1P11279 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LAMP1P11279 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.28■□□□□ 0.36
LAMP1P11279 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.28■□□□□ 0.36
LAMP1P11279 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.28■□□□□ 0.36
LAMP1P11279 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 AC010947.1-201ENST00000623454 693 ntBASIC17.28■□□□□ 0.36
LAMP1P11279 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.28■□□□□ 0.36
LAMP1P11279 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 AL024508.2-201ENST00000607749 1894 ntBASIC17.28■□□□□ 0.36
LAMP1P11279 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LAMP1P11279 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.28■□□□□ 0.36
LAMP1P11279 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
LAMP1P11279 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LAMP1P11279 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMP1P11279 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.27■□□□□ 0.36
LAMP1P11279 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.27■□□□□ 0.36
LAMP1P11279 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.27■□□□□ 0.36
LAMP1P11279 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.27■□□□□ 0.36
LAMP1P11279 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LAMP1P11279 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LAMP1P11279 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.27■□□□□ 0.36
LAMP1P11279 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.27■□□□□ 0.36
LAMP1P11279 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.27■□□□□ 0.36
LAMP1P11279 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.27■□□□□ 0.36
LAMP1P11279 MIR3180-4-201ENST00000582223 153 ntBASIC17.27■□□□□ 0.36
LAMP1P11279 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.27■□□□□ 0.36
LAMP1P11279 LTB4R2-202ENST00000528054 3092 ntBASIC17.27■□□□□ 0.36
LAMP1P11279 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.27■□□□□ 0.36
LAMP1P11279 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMP1P11279 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.27■□□□□ 0.36
LAMP1P11279 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LAMP1P11279 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
LAMP1P11279 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LAMP1P11279 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LAMP1P11279 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.27■□□□□ 0.35
LAMP1P11279 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
LAMP1P11279 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LAMP1P11279 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LAMP1P11279 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
LAMP1P11279 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.26■□□□□ 0.35
LAMP1P11279 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.26■□□□□ 0.35
LAMP1P11279 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.26■□□□□ 0.35
LAMP1P11279 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.26■□□□□ 0.35
LAMP1P11279 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LAMP1P11279 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.26■□□□□ 0.35
LAMP1P11279 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.26■□□□□ 0.35
LAMP1P11279 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.26■□□□□ 0.35
LAMP1P11279 AC009065.1-201ENST00000564055 1225 ntBASIC17.26■□□□□ 0.35
LAMP1P11279 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.26■□□□□ 0.35
LAMP1P11279 AC010240.3-201ENST00000607688 395 ntBASIC17.26■□□□□ 0.35
LAMP1P11279 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LAMP1P11279 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms