Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.01■□□□□ 0.15
UBCP0CG48 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
UBCP0CG48 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
UBCP0CG48 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 AC141586.5-201ENST00000624546 2050 ntBASIC16.01■□□□□ 0.15
UBCP0CG48 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.01■□□□□ 0.15
UBCP0CG48 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
UBCP0CG48 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
UBCP0CG48 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
UBCP0CG48 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
UBCP0CG48 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 AC009102.3-201ENST00000623118 1491 ntBASIC16■□□□□ 0.15
UBCP0CG48 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
UBCP0CG48 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 MIR149-201ENST00000384879 89 ntBASIC16■□□□□ 0.15
UBCP0CG48 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 AC097488.1-201ENST00000507834 756 ntBASIC16■□□□□ 0.15
UBCP0CG48 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16■□□□□ 0.15
UBCP0CG48 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
UBCP0CG48 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16■□□□□ 0.15
UBCP0CG48 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16■□□□□ 0.15
UBCP0CG48 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
UBCP0CG48 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16■□□□□ 0.15
UBCP0CG48 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
UBCP0CG48 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
UBCP0CG48 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
UBCP0CG48 PHGDH-209ENST00000641074 1780 ntBASIC16■□□□□ 0.15
UBCP0CG48 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBCP0CG48 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
UBCP0CG48 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
UBCP0CG48 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.99■□□□□ 0.15
UBCP0CG48 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.99■□□□□ 0.15
UBCP0CG48 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.99■□□□□ 0.15
UBCP0CG48 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.99■□□□□ 0.15
UBCP0CG48 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.99■□□□□ 0.15
UBCP0CG48 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.99■□□□□ 0.15
UBCP0CG48 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.99■□□□□ 0.15
UBCP0CG48 FAM201B-201ENST00000458407 597 ntBASIC15.99■□□□□ 0.15
UBCP0CG48 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.99■□□□□ 0.15
UBCP0CG48 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.99■□□□□ 0.15
UBCP0CG48 AP001412.1-201ENST00000608405 714 ntBASIC15.99■□□□□ 0.15
UBCP0CG48 LINC00896-202ENST00000609602 2128 ntBASIC15.99■□□□□ 0.15
UBCP0CG48 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
UBCP0CG48 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.99■□□□□ 0.15
UBCP0CG48 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
UBCP0CG48 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
UBCP0CG48 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
UBCP0CG48 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.99■□□□□ 0.15
UBCP0CG48 AL163051.1-201ENST00000569214 1512 ntBASIC15.99■□□□□ 0.15
UBCP0CG48 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBCP0CG48 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBCP0CG48 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UBCP0CG48 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
UBCP0CG48 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBCP0CG48 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.98■□□□□ 0.15
UBCP0CG48 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBCP0CG48 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UBCP0CG48 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBCP0CG48 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBCP0CG48 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UBCP0CG48 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.98■□□□□ 0.15
UBCP0CG48 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
UBCP0CG48 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
UBCP0CG48 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms