Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CTSBP07858 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.22■□□□□ 0.35
CTSBP07858 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.22■□□□□ 0.35
CTSBP07858 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.22■□□□□ 0.35
CTSBP07858 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.22■□□□□ 0.35
CTSBP07858 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 AC012615.1-201ENST00000565797 1299 ntBASIC17.22■□□□□ 0.35
CTSBP07858 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.22■□□□□ 0.35
CTSBP07858 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 AC138894.3-201ENST00000603787 634 ntBASIC17.22■□□□□ 0.35
CTSBP07858 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CTSBP07858 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CTSBP07858 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSBP07858 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSBP07858 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSBP07858 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSBP07858 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.21■□□□□ 0.35
CTSBP07858 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CTSBP07858 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.21■□□□□ 0.35
CTSBP07858 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CTSBP07858 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
CTSBP07858 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.21■□□□□ 0.35
CTSBP07858 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSBP07858 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.21■□□□□ 0.35
CTSBP07858 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSBP07858 AC104819.1-201ENST00000504587 486 ntBASIC17.21■□□□□ 0.35
CTSBP07858 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.21■□□□□ 0.35
CTSBP07858 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.21■□□□□ 0.35
CTSBP07858 AC005336.2-201ENST00000593183 939 ntBASIC17.21■□□□□ 0.35
CTSBP07858 AC099336.1-202ENST00000602961 463 ntBASIC17.21■□□□□ 0.35
CTSBP07858 AL353801.3-201ENST00000609898 542 ntBASIC17.21■□□□□ 0.35
CTSBP07858 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.21■□□□□ 0.35
CTSBP07858 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.21■□□□□ 0.35
CTSBP07858 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSBP07858 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSBP07858 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSBP07858 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSBP07858 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSBP07858 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSBP07858 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
CTSBP07858 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSBP07858 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.21■□□□□ 0.35
CTSBP07858 NSUN5P1-202ENST00000421140 1535 ntBASIC17.21■□□□□ 0.34
CTSBP07858 NSUN5P2-203ENST00000457352 1529 ntBASIC17.21■□□□□ 0.34
CTSBP07858 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CTSBP07858 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CTSBP07858 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CTSBP07858 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 AC093677.2-201ENST00000600169 1863 ntBASIC17.2■□□□□ 0.34
CTSBP07858 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.2■□□□□ 0.34
CTSBP07858 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CTSBP07858 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 NUS1P1-201ENST00000446295 882 ntBASIC17.2■□□□□ 0.34
CTSBP07858 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.2■□□□□ 0.34
CTSBP07858 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.2■□□□□ 0.34
CTSBP07858 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.2■□□□□ 0.34
CTSBP07858 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.2■□□□□ 0.34
CTSBP07858 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.2■□□□□ 0.34
CTSBP07858 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CTSBP07858 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CTSBP07858 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.2■□□□□ 0.34
CTSBP07858 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.2■□□□□ 0.34
CTSBP07858 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CTSBP07858 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSBP07858 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTSBP07858 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.19■□□□□ 0.34
CTSBP07858 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.19■□□□□ 0.34
CTSBP07858 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTSBP07858 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms