Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.33■□□□□ 0.04
CD74P04233 CROCCP5-201ENST00000436658 830 ntBASIC15.33■□□□□ 0.04
CD74P04233 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.33■□□□□ 0.04
CD74P04233 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.33■□□□□ 0.04
CD74P04233 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CD74P04233 AC083880.1-201ENST00000608266 535 ntBASIC15.33■□□□□ 0.04
CD74P04233 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.33■□□□□ 0.04
CD74P04233 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.33■□□□□ 0.04
CD74P04233 AC131212.4-201ENST00000623606 975 ntBASIC15.33■□□□□ 0.04
CD74P04233 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD74P04233 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD74P04233 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD74P04233 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD74P04233 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD74P04233 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.33■□□□□ 0.04
CD74P04233 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD74P04233 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.33■□□□□ 0.04
CD74P04233 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.33■□□□□ 0.04
CD74P04233 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.33■□□□□ 0.04
CD74P04233 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.33■□□□□ 0.04
CD74P04233 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD74P04233 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD74P04233 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.33■□□□□ 0.04
CD74P04233 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
CD74P04233 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.32■□□□□ 0.04
CD74P04233 AC034236.2-201ENST00000606662 1610 ntBASIC15.32■□□□□ 0.04
CD74P04233 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 AC018695.7-201ENST00000624587 2492 ntBASIC15.32■□□□□ 0.04
CD74P04233 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.32■□□□□ 0.04
CD74P04233 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.32■□□□□ 0.04
CD74P04233 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 AC004980.1-204ENST00000429707 299 ntBASIC15.32■□□□□ 0.04
CD74P04233 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.32■□□□□ 0.04
CD74P04233 GUSBP6-202ENST00000438529 1198 ntBASIC15.32■□□□□ 0.04
CD74P04233 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.32■□□□□ 0.04
CD74P04233 AC091390.4-202ENST00000476426 537 ntBASIC15.32■□□□□ 0.04
CD74P04233 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.32■□□□□ 0.04
CD74P04233 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.32■□□□□ 0.04
CD74P04233 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.32■□□□□ 0.04
CD74P04233 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.32■□□□□ 0.04
CD74P04233 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.32■□□□□ 0.04
CD74P04233 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.32■□□□□ 0.04
CD74P04233 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.32■□□□□ 0.04
CD74P04233 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CD74P04233 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.32■□□□□ 0.04
CD74P04233 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CD74P04233 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CD74P04233 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.32■□□□□ 0.04
CD74P04233 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.32■□□□□ 0.04
CD74P04233 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD74P04233 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.32■□□□□ 0.04
CD74P04233 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CD74P04233 CROCCP2-202ENST00000412962 2773 ntBASIC15.31■□□□□ 0.04
CD74P04233 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
CD74P04233 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CD74P04233 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.31■□□□□ 0.04
CD74P04233 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.31■□□□□ 0.04
CD74P04233 SLC29A4P1-201ENST00000398760 971 ntBASIC15.31■□□□□ 0.04
CD74P04233 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CD74P04233 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.31■□□□□ 0.04
CD74P04233 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.31■□□□□ 0.04
CD74P04233 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.31■□□□□ 0.04
CD74P04233 AC022517.1-201ENST00000592429 346 ntBASIC15.31■□□□□ 0.04
CD74P04233 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.31■□□□□ 0.04
CD74P04233 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.31■□□□□ 0.04
CD74P04233 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.31■□□□□ 0.04
CD74P04233 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.31■□□□□ 0.04
CD74P04233 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.31■□□□□ 0.04
CD74P04233 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms