Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.45□□□□□ -0.1
IFNA1P01562 AC068587.9-201ENST00000641814 219 ntBASIC14.45□□□□□ -0.1
IFNA1P01562 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IFNA1P01562 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IFNA1P01562 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
IFNA1P01562 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IFNA1P01562 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.45□□□□□ -0.1
IFNA1P01562 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IFNA1P01562 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
IFNA1P01562 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
IFNA1P01562 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IFNA1P01562 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IFNA1P01562 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IFNA1P01562 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IFNA1P01562 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.45□□□□□ -0.1
IFNA1P01562 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.44□□□□□ -0.1
IFNA1P01562 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
IFNA1P01562 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.44□□□□□ -0.1
IFNA1P01562 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
IFNA1P01562 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.44□□□□□ -0.1
IFNA1P01562 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
IFNA1P01562 AC006116.8-202ENST00000587620 1550 ntBASIC14.44□□□□□ -0.1
IFNA1P01562 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.44□□□□□ -0.1
IFNA1P01562 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.44□□□□□ -0.1
IFNA1P01562 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.44□□□□□ -0.1
IFNA1P01562 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.44□□□□□ -0.1
IFNA1P01562 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.44□□□□□ -0.1
IFNA1P01562 AL136967.2-201ENST00000623968 743 ntBASIC14.44□□□□□ -0.1
IFNA1P01562 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.44□□□□□ -0.1
IFNA1P01562 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 NORAD-201ENST00000565493 5339 ntBASIC14.44□□□□□ -0.1
IFNA1P01562 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IFNA1P01562 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
IFNA1P01562 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.43□□□□□ -0.1
IFNA1P01562 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.43□□□□□ -0.1
IFNA1P01562 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
IFNA1P01562 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
IFNA1P01562 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.43□□□□□ -0.1
IFNA1P01562 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 AC067930.6-201ENST00000623257 4947 ntBASIC14.43□□□□□ -0.1
IFNA1P01562 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.43□□□□□ -0.1
IFNA1P01562 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.43□□□□□ -0.1
IFNA1P01562 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.43□□□□□ -0.1
IFNA1P01562 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
IFNA1P01562 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
IFNA1P01562 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
IFNA1P01562 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
IFNA1P01562 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
IFNA1P01562 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
IFNA1P01562 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.43□□□□□ -0.1
IFNA1P01562 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFNA1P01562 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
IFNA1P01562 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
IFNA1P01562 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
IFNA1P01562 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
IFNA1P01562 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
IFNA1P01562 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
IFNA1P01562 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms