Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN1O95832 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN1O95832 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLDN1O95832 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN1O95832 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 AC009237.14-201ENST00000609975 1594 ntBASIC16.26■□□□□ 0.19
CLDN1O95832 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLDN1O95832 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN1O95832 TREX1-205ENST00000625293 1783 ntBASIC16.26■□□□□ 0.19
CLDN1O95832 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLDN1O95832 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN1O95832 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN1O95832 HNRNPDP1-201ENST00000439535 754 ntBASIC16.26■□□□□ 0.19
CLDN1O95832 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN1O95832 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN1O95832 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN1O95832 AC104390.1-201ENST00000555663 520 ntBASIC16.26■□□□□ 0.19
CLDN1O95832 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN1O95832 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN1O95832 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN1O95832 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLDN1O95832 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN1O95832 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN1O95832 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN1O95832 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN1O95832 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CLDN1O95832 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN1O95832 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN1O95832 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CLDN1O95832 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN1O95832 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN1O95832 AP000974.1-201ENST00000623909 2387 ntBASIC16.25■□□□□ 0.19
CLDN1O95832 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN1O95832 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN1O95832 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CLDN1O95832 SCARNA2-201ENST00000458748 420 ntBASIC16.25■□□□□ 0.19
CLDN1O95832 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN1O95832 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.25■□□□□ 0.19
CLDN1O95832 BNIP3P18-201ENST00000593976 575 ntBASIC16.25■□□□□ 0.19
CLDN1O95832 AL356488.2-201ENST00000602755 427 ntBASIC16.25■□□□□ 0.19
CLDN1O95832 AC027601.4-201ENST00000611259 610 ntBASIC16.25■□□□□ 0.19
CLDN1O95832 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN1O95832 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN1O95832 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN1O95832 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN1O95832 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN1O95832 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN1O95832 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN1O95832 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN1O95832 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN1O95832 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN1O95832 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CLDN1O95832 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CLDN1O95832 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN1O95832 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN1O95832 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN1O95832 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN1O95832 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN1O95832 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.24■□□□□ 0.19
CLDN1O95832 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN1O95832 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN1O95832 AC132008.2-207ENST00000454517 770 ntBASIC16.24■□□□□ 0.19
CLDN1O95832 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.24■□□□□ 0.19
CLDN1O95832 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 AC083906.6-201ENST00000641366 219 ntBASIC16.24■□□□□ 0.19
CLDN1O95832 AC079781.4-201ENST00000641908 219 ntBASIC16.24■□□□□ 0.19
CLDN1O95832 AC104109.2-201ENST00000602919 1418 ntBASIC16.24■□□□□ 0.19
CLDN1O95832 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN1O95832 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms