Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
UPK1BO75841 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
UPK1BO75841 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 TSPY23P-201ENST00000440136 739 ntBASIC15.9■□□□□ 0.14
UPK1BO75841 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.9■□□□□ 0.14
UPK1BO75841 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.9■□□□□ 0.14
UPK1BO75841 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.9■□□□□ 0.14
UPK1BO75841 C2orf69P4-201ENST00000565394 541 ntBASIC15.9■□□□□ 0.14
UPK1BO75841 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
UPK1BO75841 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.9■□□□□ 0.14
UPK1BO75841 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.9■□□□□ 0.14
UPK1BO75841 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.9■□□□□ 0.14
UPK1BO75841 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.9■□□□□ 0.14
UPK1BO75841 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.9■□□□□ 0.14
UPK1BO75841 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
UPK1BO75841 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.9■□□□□ 0.14
UPK1BO75841 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.9■□□□□ 0.14
UPK1BO75841 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.9■□□□□ 0.14
UPK1BO75841 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
UPK1BO75841 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.89■□□□□ 0.13
UPK1BO75841 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1BO75841 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1BO75841 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1BO75841 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
UPK1BO75841 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
UPK1BO75841 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.89■□□□□ 0.13
UPK1BO75841 AC022188.1-201ENST00000620960 1664 ntBASIC15.89■□□□□ 0.13
UPK1BO75841 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
UPK1BO75841 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
UPK1BO75841 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.89■□□□□ 0.13
UPK1BO75841 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1BO75841 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1BO75841 UNC93B3-201ENST00000308076 687 ntBASIC15.89■□□□□ 0.13
UPK1BO75841 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
UPK1BO75841 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
UPK1BO75841 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.89■□□□□ 0.13
UPK1BO75841 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.89■□□□□ 0.13
UPK1BO75841 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.89■□□□□ 0.13
UPK1BO75841 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.89■□□□□ 0.13
UPK1BO75841 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1BO75841 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
UPK1BO75841 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.89■□□□□ 0.13
UPK1BO75841 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1BO75841 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.89■□□□□ 0.13
UPK1BO75841 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1BO75841 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.89■□□□□ 0.13
UPK1BO75841 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
UPK1BO75841 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1BO75841 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1BO75841 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.88■□□□□ 0.13
UPK1BO75841 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1BO75841 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1BO75841 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1BO75841 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.88■□□□□ 0.13
UPK1BO75841 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.88■□□□□ 0.13
UPK1BO75841 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
UPK1BO75841 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.88■□□□□ 0.13
UPK1BO75841 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1BO75841 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1BO75841 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1BO75841 AC132872.4-202ENST00000622924 2756 ntBASIC15.88■□□□□ 0.13
UPK1BO75841 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.88■□□□□ 0.13
UPK1BO75841 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1BO75841 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
UPK1BO75841 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1BO75841 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
UPK1BO75841 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1BO75841 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1BO75841 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1BO75841 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
UPK1BO75841 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1BO75841 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
UPK1BO75841 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1BO75841 GMCL1P1-201ENST00000463439 1581 ntBASIC15.87■□□□□ 0.13
UPK1BO75841 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1BO75841 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
UPK1BO75841 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1BO75841 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1BO75841 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1BO75841 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1BO75841 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1BO75841 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
UPK1BO75841 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1BO75841 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.87■□□□□ 0.13
UPK1BO75841 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.87■□□□□ 0.13
UPK1BO75841 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms