Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GPC4O75487 SLC25A3P1-201ENST00000443844 931 ntBASIC18.28■□□□□ 0.52
GPC4O75487 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.28■□□□□ 0.52
GPC4O75487 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
GPC4O75487 AL512604.3-201ENST00000569583 964 ntBASIC18.28■□□□□ 0.52
GPC4O75487 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.28■□□□□ 0.52
GPC4O75487 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
GPC4O75487 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GPC4O75487 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GPC4O75487 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
GPC4O75487 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.28■□□□□ 0.52
GPC4O75487 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.28■□□□□ 0.52
GPC4O75487 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
GPC4O75487 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.28■□□□□ 0.52
GPC4O75487 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GPC4O75487 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.27■□□□□ 0.52
GPC4O75487 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC4O75487 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC4O75487 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
GPC4O75487 AC034236.2-201ENST00000606662 1610 ntBASIC18.27■□□□□ 0.52
GPC4O75487 LTB4R2-202ENST00000528054 3092 ntBASIC18.27■□□□□ 0.52
GPC4O75487 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GPC4O75487 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC4O75487 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.27■□□□□ 0.52
GPC4O75487 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC4O75487 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC4O75487 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.27■□□□□ 0.52
GPC4O75487 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.27■□□□□ 0.52
GPC4O75487 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
GPC4O75487 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.27■□□□□ 0.52
GPC4O75487 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC4O75487 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
GPC4O75487 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC4O75487 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.27■□□□□ 0.52
GPC4O75487 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.27■□□□□ 0.52
GPC4O75487 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.27■□□□□ 0.52
GPC4O75487 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC4O75487 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.27■□□□□ 0.52
GPC4O75487 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
GPC4O75487 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.27■□□□□ 0.52
GPC4O75487 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC4O75487 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GPC4O75487 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
GPC4O75487 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GPC4O75487 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.27■□□□□ 0.51
GPC4O75487 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
GPC4O75487 AL499627.1-201ENST00000569373 2188 ntBASIC18.27■□□□□ 0.51
GPC4O75487 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
GPC4O75487 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
GPC4O75487 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
GPC4O75487 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GPC4O75487 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC4O75487 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC4O75487 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.26■□□□□ 0.51
GPC4O75487 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
GPC4O75487 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC4O75487 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.26■□□□□ 0.51
GPC4O75487 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.26■□□□□ 0.51
GPC4O75487 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC4O75487 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC4O75487 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC4O75487 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC4O75487 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.26■□□□□ 0.51
GPC4O75487 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC4O75487 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
GPC4O75487 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC4O75487 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC4O75487 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.26■□□□□ 0.51
GPC4O75487 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.26■□□□□ 0.51
GPC4O75487 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.26■□□□□ 0.51
GPC4O75487 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.26■□□□□ 0.51
GPC4O75487 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.26■□□□□ 0.51
GPC4O75487 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC4O75487 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
GPC4O75487 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.26■□□□□ 0.51
GPC4O75487 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.26■□□□□ 0.51
GPC4O75487 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.26■□□□□ 0.51
GPC4O75487 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
GPC4O75487 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
GPC4O75487 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC4O75487 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
GPC4O75487 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GPC4O75487 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
GPC4O75487 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GPC4O75487 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC4O75487 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GPC4O75487 OR6D1P-203ENST00000641209 4860 ntBASIC18.25■□□□□ 0.51
GPC4O75487 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GPC4O75487 AC112777.1-201ENST00000540175 1423 ntBASIC18.25■□□□□ 0.51
GPC4O75487 HOXB1-202ENST00000577092 1414 ntBASIC18.25■□□□□ 0.51
GPC4O75487 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
GPC4O75487 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.25■□□□□ 0.51
GPC4O75487 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms