Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
ZNF253O75346 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ZNF253O75346 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZNF253O75346 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF253O75346 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ZNF253O75346 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF253O75346 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ZNF253O75346 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF253O75346 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF253O75346 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF253O75346 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.22□□□□□ -0.13
ZNF253O75346 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF253O75346 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
ZNF253O75346 AC012317.2-201ENST00000623305 2251 ntBASIC14.22□□□□□ -0.13
ZNF253O75346 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ZNF253O75346 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF253O75346 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF253O75346 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ZNF253O75346 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF253O75346 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF253O75346 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
ZNF253O75346 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ZNF253O75346 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF253O75346 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
ZNF253O75346 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
ZNF253O75346 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ZNF253O75346 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF253O75346 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ZNF253O75346 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.21□□□□□ -0.13
ZNF253O75346 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ZNF253O75346 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF253O75346 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.21□□□□□ -0.13
ZNF253O75346 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF253O75346 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ZNF253O75346 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ZNF253O75346 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ZNF253O75346 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ZNF253O75346 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF253O75346 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF253O75346 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF253O75346 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF253O75346 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF253O75346 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF253O75346 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF253O75346 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF253O75346 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
ZNF253O75346 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ZNF253O75346 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ZNF253O75346 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ZNF253O75346 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ZNF253O75346 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms