Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE3O75131 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE3O75131 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE3O75131 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE3O75131 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE3O75131 AP002383.4-201ENST00000442518 975 ntBASIC17.49■□□□□ 0.39
CPNE3O75131 RNF126P1-202ENST00000569893 925 ntBASIC17.49■□□□□ 0.39
CPNE3O75131 MIR3180-1-201ENST00000580374 94 ntBASIC17.49■□□□□ 0.39
CPNE3O75131 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.49■□□□□ 0.39
CPNE3O75131 MIR3180-3-201ENST00000584616 94 ntBASIC17.49■□□□□ 0.39
CPNE3O75131 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE3O75131 AL121894.2-201ENST00000602977 491 ntBASIC17.49■□□□□ 0.39
CPNE3O75131 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE3O75131 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 Z83836.1-201ENST00000624605 1642 ntBASIC17.49■□□□□ 0.39
CPNE3O75131 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CPNE3O75131 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE3O75131 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CPNE3O75131 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE3O75131 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CPNE3O75131 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CPNE3O75131 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE3O75131 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE3O75131 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE3O75131 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE3O75131 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CPNE3O75131 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CPNE3O75131 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE3O75131 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CPNE3O75131 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.48■□□□□ 0.39
CPNE3O75131 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE3O75131 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE3O75131 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE3O75131 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE3O75131 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE3O75131 AP000593.1-201ENST00000393668 712 ntBASIC17.48■□□□□ 0.39
CPNE3O75131 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.48■□□□□ 0.39
CPNE3O75131 TPM4P1-201ENST00000436100 807 ntBASIC17.48■□□□□ 0.39
CPNE3O75131 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE3O75131 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.48■□□□□ 0.39
CPNE3O75131 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.48■□□□□ 0.39
CPNE3O75131 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE3O75131 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE3O75131 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE3O75131 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CPNE3O75131 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE3O75131 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE3O75131 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE3O75131 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE3O75131 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE3O75131 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CPNE3O75131 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE3O75131 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE3O75131 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE3O75131 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
CPNE3O75131 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CPNE3O75131 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE3O75131 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.47■□□□□ 0.39
CPNE3O75131 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE3O75131 AC005332.3-201ENST00000589904 676 ntBASIC17.47■□□□□ 0.39
CPNE3O75131 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CPNE3O75131 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.47■□□□□ 0.39
CPNE3O75131 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE3O75131 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CPNE3O75131 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CPNE3O75131 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE3O75131 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms