Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYN3O14994 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYN3O14994 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYN3O14994 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYN3O14994 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYN3O14994 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.18■□□□□ 0.66
SYN3O14994 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYN3O14994 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYN3O14994 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.18■□□□□ 0.66
SYN3O14994 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.18■□□□□ 0.66
SYN3O14994 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.18■□□□□ 0.66
SYN3O14994 SLC25A6P4-201ENST00000586535 553 ntBASIC19.18■□□□□ 0.66
SYN3O14994 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.18■□□□□ 0.66
SYN3O14994 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYN3O14994 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYN3O14994 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYN3O14994 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYN3O14994 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYN3O14994 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYN3O14994 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYN3O14994 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYN3O14994 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYN3O14994 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYN3O14994 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.17■□□□□ 0.66
SYN3O14994 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SYN3O14994 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYN3O14994 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.17■□□□□ 0.66
SYN3O14994 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYN3O14994 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SYN3O14994 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SYN3O14994 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYN3O14994 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYN3O14994 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SYN3O14994 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYN3O14994 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.17■□□□□ 0.66
SYN3O14994 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYN3O14994 AC132008.2-207ENST00000454517 770 ntBASIC19.17■□□□□ 0.66
SYN3O14994 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.17■□□□□ 0.66
SYN3O14994 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SYN3O14994 AC011467.2-201ENST00000598425 242 ntBASIC19.17■□□□□ 0.66
SYN3O14994 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.17■□□□□ 0.66
SYN3O14994 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SYN3O14994 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYN3O14994 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYN3O14994 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYN3O14994 INTS4P1-201ENST00000438455 1935 ntBASIC19.17■□□□□ 0.66
SYN3O14994 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYN3O14994 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SYN3O14994 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYN3O14994 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYN3O14994 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.16■□□□□ 0.66
SYN3O14994 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
SYN3O14994 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.16■□□□□ 0.66
SYN3O14994 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SYN3O14994 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SYN3O14994 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
SYN3O14994 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.16■□□□□ 0.66
SYN3O14994 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.16■□□□□ 0.66
SYN3O14994 AC132938.6-201ENST00000623828 1655 ntBASIC19.16■□□□□ 0.66
SYN3O14994 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.16■□□□□ 0.66
SYN3O14994 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.16■□□□□ 0.66
SYN3O14994 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.16■□□□□ 0.66
SYN3O14994 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SYN3O14994 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.16■□□□□ 0.66
SYN3O14994 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.16■□□□□ 0.66
SYN3O14994 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SYN3O14994 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SYN3O14994 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYN3O14994 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SYN3O14994 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYN3O14994 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYN3O14994 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYN3O14994 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYN3O14994 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYN3O14994 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYN3O14994 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.15■□□□□ 0.66
SYN3O14994 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SYN3O14994 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.15■□□□□ 0.66
SYN3O14994 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYN3O14994 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SYN3O14994 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.15■□□□□ 0.66
SYN3O14994 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYN3O14994 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms