Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.03■□□□□ 0.48
IFRD1O00458 AL163051.1-201ENST00000569214 1512 ntBASIC18.03■□□□□ 0.48
IFRD1O00458 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
IFRD1O00458 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.03■□□□□ 0.48
IFRD1O00458 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.03■□□□□ 0.48
IFRD1O00458 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.03■□□□□ 0.48
IFRD1O00458 NTF6B-201ENST00000591913 560 ntBASIC18.03■□□□□ 0.48
IFRD1O00458 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.03■□□□□ 0.48
IFRD1O00458 AL157888.1-201ENST00000631930 593 ntBASIC18.03■□□□□ 0.48
IFRD1O00458 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
IFRD1O00458 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
IFRD1O00458 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFRD1O00458 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.03■□□□□ 0.48
IFRD1O00458 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
IFRD1O00458 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
IFRD1O00458 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.02■□□□□ 0.48
IFRD1O00458 AC126763.1-201ENST00000552015 2118 ntBASIC18.02■□□□□ 0.48
IFRD1O00458 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFRD1O00458 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFRD1O00458 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFRD1O00458 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
IFRD1O00458 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFRD1O00458 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
IFRD1O00458 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFRD1O00458 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.02■□□□□ 0.48
IFRD1O00458 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
IFRD1O00458 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
IFRD1O00458 SPDYE15P-201ENST00000424157 909 ntBASIC18.02■□□□□ 0.48
IFRD1O00458 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.02■□□□□ 0.48
IFRD1O00458 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFRD1O00458 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
IFRD1O00458 AC087388.1-201ENST00000571370 1112 ntBASIC18.02■□□□□ 0.48
IFRD1O00458 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
IFRD1O00458 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.02■□□□□ 0.48
IFRD1O00458 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFRD1O00458 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
IFRD1O00458 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
IFRD1O00458 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.02■□□□□ 0.47
IFRD1O00458 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.01■□□□□ 0.47
IFRD1O00458 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFRD1O00458 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.01■□□□□ 0.47
IFRD1O00458 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
IFRD1O00458 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IFRD1O00458 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFRD1O00458 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IFRD1O00458 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFRD1O00458 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFRD1O00458 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFRD1O00458 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFRD1O00458 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFRD1O00458 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFRD1O00458 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IFRD1O00458 AC112907.2-201ENST00000448639 330 ntBASIC18.01■□□□□ 0.47
IFRD1O00458 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
IFRD1O00458 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
IFRD1O00458 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.01■□□□□ 0.47
IFRD1O00458 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
IFRD1O00458 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFRD1O00458 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFRD1O00458 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFRD1O00458 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
IFRD1O00458 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.01■□□□□ 0.47
IFRD1O00458 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
IFRD1O00458 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFRD1O00458 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFRD1O00458 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
IFRD1O00458 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFRD1O00458 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
IFRD1O00458 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18■□□□□ 0.47
IFRD1O00458 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18■□□□□ 0.47
IFRD1O00458 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
IFRD1O00458 MIR149-201ENST00000384879 89 ntBASIC18■□□□□ 0.47
IFRD1O00458 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18■□□□□ 0.47
IFRD1O00458 KRT18P38-201ENST00000449496 1282 ntBASIC18■□□□□ 0.47
IFRD1O00458 AL671277.2-201ENST00000458060 996 ntBASIC18■□□□□ 0.47
IFRD1O00458 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18■□□□□ 0.47
IFRD1O00458 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18■□□□□ 0.47
IFRD1O00458 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18■□□□□ 0.47
IFRD1O00458 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18■□□□□ 0.47
IFRD1O00458 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18■□□□□ 0.47
IFRD1O00458 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18■□□□□ 0.47
IFRD1O00458 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFRD1O00458 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IFRD1O00458 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms