Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 AC099343.3-201ENST00000605834 2503 ntBASIC16.88■□□□□ 0.29
TNFRSF11BO00300 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 AL355802.2-201ENST00000402069 882 ntBASIC16.88■□□□□ 0.29
TNFRSF11BO00300 AL023284.2-201ENST00000405850 579 ntBASIC16.88■□□□□ 0.29
TNFRSF11BO00300 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 MCCD1P1-208ENST00000445732 328 ntBASIC16.88■□□□□ 0.29
TNFRSF11BO00300 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 AC108860.2-201ENST00000562760 2183 ntBASIC16.88■□□□□ 0.29
TNFRSF11BO00300 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TNFRSF11BO00300 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.87■□□□□ 0.29
TNFRSF11BO00300 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF11BO00300 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms