Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 MIR3180-4-201ENST00000582223 153 ntBASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NPIPA2E9PIF3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 AC005332.3-201ENST00000589904 676 ntBASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
NPIPA2E9PIF3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPIPA2E9PIF3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
NPIPA2E9PIF3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPIPA2E9PIF3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.58■□□□□ 0.25
NPIPA2E9PIF3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
NPIPA2E9PIF3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPIPA2E9PIF3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPIPA2E9PIF3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 LINC00265-3P-201ENST00000447588 903 ntBASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 AC009065.1-201ENST00000564055 1225 ntBASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 AL138781.2-201ENST00000617896 1843 ntBASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA2E9PIF3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms