Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 KRT8P2-201ENST00000556193 944 ntBASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 AL109620.1-201ENST00000618738 1197 ntBASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SPDYE4A6NLX3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPDYE4A6NLX3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPDYE4A6NLX3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPDYE4A6NLX3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPDYE4A6NLX3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 AC117947.1-201ENST00000427448 529 ntBASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 AC139887.4-201ENST00000607877 719 ntBASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 AL358472.4-201ENST00000633140 710 ntBASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 HLA-A-209ENST00000638375 975 ntBASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 AC141586.5-201ENST00000624546 2050 ntBASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.57■□□□□ 0.88
SPDYE4A6NLX3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 AC080080.1-201ENST00000625121 2420 ntBASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 AC063952.2-201ENST00000498792 1227 ntBASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SPDYE4A6NLX3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPDYE4A6NLX3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPDYE4A6NLX3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPDYE4A6NLX3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SPDYE4A6NLX3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms