Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 AC126763.1-201ENST00000552015 2118 ntBASIC18.5■□□□□ 0.55
CAPN8A6NHC0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 NOC2LP1-202ENST00000452600 2235 ntBASIC18.5■□□□□ 0.55
CAPN8A6NHC0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 KRT18P38-201ENST00000449496 1282 ntBASIC18.5■□□□□ 0.55
CAPN8A6NHC0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 AC138932.1-201ENST00000534164 6830 ntBASIC18.5■□□□□ 0.55
CAPN8A6NHC0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN8A6NHC0 WIZP1-201ENST00000531444 2299 ntBASIC18.49■□□□□ 0.55
CAPN8A6NHC0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 MIR149-201ENST00000384879 89 ntBASIC18.49■□□□□ 0.55
CAPN8A6NHC0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.49■□□□□ 0.55
CAPN8A6NHC0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.48■□□□□ 0.55
CAPN8A6NHC0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 AC073592.3-201ENST00000625118 1834 ntBASIC18.48■□□□□ 0.55
CAPN8A6NHC0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN8A6NHC0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms