Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RCCD1A6NED2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.38■□□□□ 0.69
RCCD1A6NED2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RCCD1A6NED2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.38■□□□□ 0.69
RCCD1A6NED2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.38■□□□□ 0.69
RCCD1A6NED2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.38■□□□□ 0.69
RCCD1A6NED2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.38■□□□□ 0.69
RCCD1A6NED2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.38■□□□□ 0.69
RCCD1A6NED2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RCCD1A6NED2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RCCD1A6NED2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.38■□□□□ 0.69
RCCD1A6NED2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
RCCD1A6NED2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RCCD1A6NED2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCCD1A6NED2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.37■□□□□ 0.69
RCCD1A6NED2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCCD1A6NED2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCCD1A6NED2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RCCD1A6NED2 AC084018.2-201ENST00000613093 2607 ntBASIC19.37■□□□□ 0.69
RCCD1A6NED2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RCCD1A6NED2 KRT18P23-201ENST00000435622 1283 ntBASIC19.37■□□□□ 0.69
RCCD1A6NED2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.37■□□□□ 0.69
RCCD1A6NED2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.37■□□□□ 0.69
RCCD1A6NED2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.37■□□□□ 0.69
RCCD1A6NED2 CD99P1-205ENST00000527459 561 ntBASIC19.37■□□□□ 0.69
RCCD1A6NED2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.37■□□□□ 0.69
RCCD1A6NED2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
RCCD1A6NED2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCCD1A6NED2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
RCCD1A6NED2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.37■□□□□ 0.69
RCCD1A6NED2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RCCD1A6NED2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCCD1A6NED2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RCCD1A6NED2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCCD1A6NED2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCCD1A6NED2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCCD1A6NED2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RCCD1A6NED2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.37■□□□□ 0.69
RCCD1A6NED2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCCD1A6NED2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RCCD1A6NED2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RCCD1A6NED2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.36■□□□□ 0.69
RCCD1A6NED2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.36■□□□□ 0.69
RCCD1A6NED2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RCCD1A6NED2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.36■□□□□ 0.69
RCCD1A6NED2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RCCD1A6NED2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RCCD1A6NED2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.36■□□□□ 0.69
RCCD1A6NED2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RCCD1A6NED2 REXO1L10P-201ENST00000615707 1290 ntBASIC19.36■□□□□ 0.69
RCCD1A6NED2 REXO1L12P-201ENST00000622156 912 ntBASIC19.36■□□□□ 0.69
RCCD1A6NED2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RCCD1A6NED2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.36■□□□□ 0.69
RCCD1A6NED2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.36■□□□□ 0.69
RCCD1A6NED2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.36■□□□□ 0.69
RCCD1A6NED2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.36■□□□□ 0.69
RCCD1A6NED2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RCCD1A6NED2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 AD000864.1-201ENST00000624076 2295 ntBASIC19.35■□□□□ 0.69
RCCD1A6NED2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 CRYGFP-201ENST00000418459 633 ntBASIC19.35■□□□□ 0.69
RCCD1A6NED2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 AL023803.3-201ENST00000615559 522 ntBASIC19.35■□□□□ 0.69
RCCD1A6NED2 FAM197Y4-202ENST00000622692 608 ntBASIC19.35■□□□□ 0.69
RCCD1A6NED2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 AC132938.6-201ENST00000623828 1655 ntBASIC19.35■□□□□ 0.69
RCCD1A6NED2 LINC00602-201ENST00000629776 2065 ntBASIC19.35■□□□□ 0.69
RCCD1A6NED2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RCCD1A6NED2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RCCD1A6NED2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCCD1A6NED2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCCD1A6NED2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RCCD1A6NED2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCCD1A6NED2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCCD1A6NED2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
RCCD1A6NED2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms