Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM129A0AVI4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM129A0AVI4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM129A0AVI4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM129A0AVI4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM129A0AVI4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM129A0AVI4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM129A0AVI4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TMEM129A0AVI4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM129A0AVI4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TMEM129A0AVI4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM129A0AVI4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM129A0AVI4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM129A0AVI4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM129A0AVI4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 KRT18P41-201ENST00000518924 1277 ntBASIC16.5■□□□□ 0.23
TMEM129A0AVI4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 AC010947.1-201ENST00000623454 693 ntBASIC16.5■□□□□ 0.23
TMEM129A0AVI4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM129A0AVI4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 AC108860.2-201ENST00000562760 2183 ntBASIC16.49■□□□□ 0.23
TMEM129A0AVI4 AC099398.1-201ENST00000567919 2776 ntBASIC16.49■□□□□ 0.23
TMEM129A0AVI4 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 AP005242.2-201ENST00000580065 1175 ntBASIC16.49■□□□□ 0.23
TMEM129A0AVI4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TMEM129A0AVI4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 KRT8P11-201ENST00000409686 1436 ntBASIC16.48■□□□□ 0.23
TMEM129A0AVI4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TMEM129A0AVI4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms