Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 AC022898.2-201ENST00000616822 1312 ntBASIC17.97■□□□□ 0.47
CCDC163A0A0D9SF12 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 AP002414.3-201ENST00000589352 1468 ntBASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 DNAJB3-202ENST00000449667 1266 ntBASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 AC112698.1-201ENST00000510299 916 ntBASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 AC006557.2-201ENST00000592985 1240 ntBASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 AL022326.1-202ENST00000641533 845 ntBASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC163A0A0D9SF12 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 PRYP5-201ENST00000451909 266 ntBASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 MIR1199-201ENST00000621445 119 ntBASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC163A0A0D9SF12 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 AC079776.2-201ENST00000641154 1609 ntBASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms