Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 AL135905.2-201ENST00000584934 1404 ntBASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 FAM197Y1-201ENST00000421178 764 ntBASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 CD99P1-205ENST00000527459 561 ntBASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 MIR4651-201ENST00000582622 73 ntBASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-7A0A0A0MS04 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-7A0A0A0MS04 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-7A0A0A0MS04 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-7A0A0A0MS04 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-7A0A0A0MS04 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-7A0A0A0MS04 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-7A0A0A0MS04 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-7A0A0A0MS04 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-7A0A0A0MS04 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-7A0A0A0MS04 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV6-7A0A0A0MS04 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV6-7A0A0A0MS04 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 AL096828.2-201ENST00000567259 1965 ntBASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 AL121761.2-201ENST00000598007 1648 ntBASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 CA15P1-201ENST00000481698 905 ntBASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 CD177P1-201ENST00000606252 935 ntBASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 AL359736.2-201ENST00000621992 437 ntBASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 FAM197Y4-202ENST00000622692 608 ntBASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-7A0A0A0MS04 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 MFAP1P1-201ENST00000442257 1255 ntBASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 AC116562.2-201ENST00000507042 360 ntBASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms